Sciurus carolinensis (gray squirrel): 124978818
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Entry
124978818 CDS
T08117
Name
(RefSeq) beta-1,4-galactosyltransferase 2 isoform X1
KO
K07967
beta-1,4-galactosyltransferase 2 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00052
Galactose metabolism
ncar00510
N-Glycan biosynthesis
ncar00513
Various types of N-glycan biosynthesis
ncar00514
Other types of O-glycan biosynthesis
ncar00515
Mannose type O-glycan biosynthesis
ncar00533
Glycosaminoglycan biosynthesis - keratan sulfate
ncar00601
Glycosphingolipid biosynthesis - lacto and neolacto series
ncar01100
Metabolic pathways
Module
ncar_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
ncar_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
124978818
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
124978818
00513 Various types of N-glycan biosynthesis
124978818
00515 Mannose type O-glycan biosynthesis
124978818
00514 Other types of O-glycan biosynthesis
124978818
00533 Glycosaminoglycan biosynthesis - keratan sulfate
124978818
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
124978818
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncar01003
]
124978818
Enzymes [BR:
ncar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
124978818
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
124978818
2.4.1.90 N-acetyllactosamine synthase
124978818
Glycosyltransferases [BR:
ncar01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
124978818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
124978818
NCBI-ProteinID:
XP_047398601
EnsemblRapid:
ENSSCRG00010000287
LinkDB
All DBs
Position
1:complement(175986715..175996609)
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AA seq
429 aa
AA seq
DB search
MLRATSQPGPSWPGLLSSETSPWLLEGLNEVMSMKCSCIVATQPAAGCPGPLGGPAAACG
MSRLLGGTLERVCKAVLLLCLLHFLVAVILYFDVYAQHLAFFSRFSARSPARVLHPAASS
STNCSRPNATAPSSGLPEVPSARPGPTVPVLPPCPDLPPGLVGRLLIEFTSPMPLERVQR
ENPGVLLGGRYTPPDCTPAQTVAVIIPFRHREHHLRYWLHYLHPILRRQRLRYGIYVINQ
HGEDTFNRAKLLNVGFLEALKEDAAYDCFIFSDVDLVPMDDRNLYRCGDQPRHFAIAMDK
FGFRLPYAGYFGGVSGLSKAQFLRINGFPNEYWGWGGEDDDIFNRISLTGMKISRPDIRI
GRYRMIKHDRDKHNEPNPQRFTKIQNTKLTMKRDGIGSVRYQVLEVSRQPLFTNITVDIG
RPPSWPPRG
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgctgagggccacttcccagcctgggcccagttggcctggcctgctttcctctgagacc
tcaccatggctcctggaaggactaaatgaagtcatgagtatgaagtgttcctgcattgta
gctactcagccggcagccggatgcccgggcccattgggcgggccggcggccgcctgcggg
atgagcagactgctgggggggacgctggagcgcgtctgcaaggctgtgctccttctctgc
ctgctgcacttccttgtggccgtcatcctgtactttgacgtctatgcccagcacctggcc
ttcttcagccgcttcagtgcccgcagccctgcccgtgtcctccacccggcagccagcagc
agcaccaactgctctcggcccaacgccactgcccccagctctgggctccctgaggtcccc
agtgcccggcccggccccacagttcctgtcctcccaccctgtcctgacctaccacctggt
cttgtgggccgactgctgattgagttcacctcacccatgcccctggagcgggtgcagagg
gagaacccaggtgtgcttctggggggccgctacacaccgcctgactgcaccccagcccag
acagtggcagtcatcatcccctttagacaccgggagcatcacctgcgctactggctccac
tatctgcaccccatcttgaggcggcagcggctacgctatggcatctatgtcatcaatcag
catggtgaggacaccttcaaccgagccaagctgctcaacgtgggtttcctagaggcgttg
aaggaggacgcggcctatgactgcttcatcttcagcgatgtggacctggtccccatggat
gatcgcaatctataccgctgtggcgaccagccccgccactttgccattgccatggacaag
tttggcttccggctgccctatgctggctactttggaggtgtgtcaggcttgagcaaagcc
cagtttctgagaatcaatggcttccccaacgagtactggggctggggtggcgaggatgat
gacatcttcaaccggatctccctgactgggatgaagatctcacgcccagacatccgaata
ggccgctatcgtatgatcaagcacgaccgggacaagcataacgagcccaaccctcagagg
tttaccaagattcaaaatacgaagctgaccatgaagcgggacggcatcgggtcagtgcgg
taccaggtcttagaggtgtctcggcaaccgcttttcaccaacatcacagtggacattggg
cggcctccatcatggccccctcgaggctga
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