KEGG   Sciurus carolinensis (gray squirrel): 124978818
Entry
124978818         CDS       T08117                                 
Name
(RefSeq) beta-1,4-galactosyltransferase 2 isoform X1
  KO
K07967  beta-1,4-galactosyltransferase 2 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar00052  Galactose metabolism
ncar00510  N-Glycan biosynthesis
ncar00513  Various types of N-glycan biosynthesis
ncar00514  Other types of O-glycan biosynthesis
ncar00515  Mannose type O-glycan biosynthesis
ncar00533  Glycosaminoglycan biosynthesis - keratan sulfate
ncar00601  Glycosphingolipid biosynthesis - lacto and neolacto series
ncar01100  Metabolic pathways
Module
ncar_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
ncar_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    124978818
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    124978818
   00513 Various types of N-glycan biosynthesis
    124978818
   00515 Mannose type O-glycan biosynthesis
    124978818
   00514 Other types of O-glycan biosynthesis
    124978818
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    124978818
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    124978818
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:ncar01003]
    124978818
Enzymes [BR:ncar01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     124978818
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     124978818
    2.4.1.90  N-acetyllactosamine synthase
     124978818
Glycosyltransferases [BR:ncar01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   124978818
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C Glyco_tranf_2_2
Other DBs
NCBI-GeneID: 124978818
NCBI-ProteinID: XP_047398601
EnsemblRapid: ENSSCRG00010000287
LinkDB
Position
1:complement(175986715..175996609)
AA seq 429 aa
MLRATSQPGPSWPGLLSSETSPWLLEGLNEVMSMKCSCIVATQPAAGCPGPLGGPAAACG
MSRLLGGTLERVCKAVLLLCLLHFLVAVILYFDVYAQHLAFFSRFSARSPARVLHPAASS
STNCSRPNATAPSSGLPEVPSARPGPTVPVLPPCPDLPPGLVGRLLIEFTSPMPLERVQR
ENPGVLLGGRYTPPDCTPAQTVAVIIPFRHREHHLRYWLHYLHPILRRQRLRYGIYVINQ
HGEDTFNRAKLLNVGFLEALKEDAAYDCFIFSDVDLVPMDDRNLYRCGDQPRHFAIAMDK
FGFRLPYAGYFGGVSGLSKAQFLRINGFPNEYWGWGGEDDDIFNRISLTGMKISRPDIRI
GRYRMIKHDRDKHNEPNPQRFTKIQNTKLTMKRDGIGSVRYQVLEVSRQPLFTNITVDIG
RPPSWPPRG
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgctgagggccacttcccagcctgggcccagttggcctggcctgctttcctctgagacc
tcaccatggctcctggaaggactaaatgaagtcatgagtatgaagtgttcctgcattgta
gctactcagccggcagccggatgcccgggcccattgggcgggccggcggccgcctgcggg
atgagcagactgctgggggggacgctggagcgcgtctgcaaggctgtgctccttctctgc
ctgctgcacttccttgtggccgtcatcctgtactttgacgtctatgcccagcacctggcc
ttcttcagccgcttcagtgcccgcagccctgcccgtgtcctccacccggcagccagcagc
agcaccaactgctctcggcccaacgccactgcccccagctctgggctccctgaggtcccc
agtgcccggcccggccccacagttcctgtcctcccaccctgtcctgacctaccacctggt
cttgtgggccgactgctgattgagttcacctcacccatgcccctggagcgggtgcagagg
gagaacccaggtgtgcttctggggggccgctacacaccgcctgactgcaccccagcccag
acagtggcagtcatcatcccctttagacaccgggagcatcacctgcgctactggctccac
tatctgcaccccatcttgaggcggcagcggctacgctatggcatctatgtcatcaatcag
catggtgaggacaccttcaaccgagccaagctgctcaacgtgggtttcctagaggcgttg
aaggaggacgcggcctatgactgcttcatcttcagcgatgtggacctggtccccatggat
gatcgcaatctataccgctgtggcgaccagccccgccactttgccattgccatggacaag
tttggcttccggctgccctatgctggctactttggaggtgtgtcaggcttgagcaaagcc
cagtttctgagaatcaatggcttccccaacgagtactggggctggggtggcgaggatgat
gacatcttcaaccggatctccctgactgggatgaagatctcacgcccagacatccgaata
ggccgctatcgtatgatcaagcacgaccgggacaagcataacgagcccaaccctcagagg
tttaccaagattcaaaatacgaagctgaccatgaagcgggacggcatcgggtcagtgcgg
taccaggtcttagaggtgtctcggcaaccgcttttcaccaacatcacagtggacattggg
cggcctccatcatggccccctcgaggctga

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