Sciurus carolinensis (gray squirrel): 124979563
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Entry
124979563 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: histone-lysine N-methyltransferase PRDM7-like
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00310
Lysine degradation
ncar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
124979563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124979563
03036 Chromosome and associated proteins [BR:
ncar03036
]
124979563
Enzymes [BR:
ncar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
124979563
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
124979563
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
124979563
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
124979563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
SSXRD
KRAB
SET
FOG1-like_PR
zf_PR_Knuckle
YscJ_FliF_C
Motif
Other DBs
NCBI-GeneID:
124979563
NCBI-ProteinID:
XP_047399875
LinkDB
All DBs
Position
3:182652683..182673073
Genome browser
AA seq
566 aa
AA seq
DB search
MLHEVLDGTPEQEKPAPADSVLAQTWWLKRSAWLRLRRRLLRRRQRRRRRLCVKDAFKDI
SIYFSKEEWAEMGEWEKIRYRNVKRNYNMLISIGLRAPRPAFMCHQRQTIKLQMDDTEDS
DEEWTPRQQVKPPWVASRIEQNKHQKGMPGVLLSNESNLKELSGTTNLLNTSGSEHVQKP
VSPHREVTTSGQHSRQKLELRRKEVEVKMYSLRERKDRAYEEVSEPQDDDYLYCDKCQNF
FIDSCAAHGPPTFVKDNVIEKGHSNHSALSLPPGLRIGPSSIPEAGLGVWNEASSLPLGL
HFGPYRGQITEDEEAANSGYSWLITKGRNCYEYVDGKDESQANWMRYVNCARDDEEQNLV
AFQYHRQIFYRTCKVVRPGCELLVWYGDEYGQELGIKWGSRWKKELSAGKGXHHCGSLNK
GEKSFPLRIFIFQLSSRVTCSLKPQNQSQRSILVPHALWPSPVRNSSVNMWIAVTPLRSS
QEHLQEKTSNXRIPIQGILFKNSIILIHTAGMTKLEVKKSKEDPQEPCGKSPAEDVLTQT
TSGLLRRDAQQRPRLVLCPQFLACSS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatgaggtcctagatgggaccccggaacaggaaaagcctgcacccgccgactcc
gtcctggctcagacgtggtggctgaagcgcagcgcttggctgcggctgcggcggcggctg
ctgcggcggcgacagcggaggcggcggcggctgtgcgttaaagatgctttcaaagacatt
tccatttacttctccaaggaagaatgggccgagatgggagagtgggagaaaattcgctat
aggaatgtgaaaaggaactataatatgctgatatccataggtctcagagcccctcgacca
gctttcatgtgtcaccaaaggcaaaccatcaaattgcagatggatgacactgaggattct
gatgaagaatggacacctaggcaacaagtcaaacctccttgggtggcctccagaatagaa
caaaataaacaccagaagggaatgcctggggtgctgttaagtaatgaatctaatttgaaa
gaattgtcaggaacaacaaatttactgaacacaagtggctcagaacatgtccagaaacca
gtgtcccctcacagagaagtaactacctctggacagcactccagacaaaaattggaactc
aggagaaaggaggtcgaagtgaagatgtacagcctgcgagaaaggaaggaccgtgcctac
gaagaggtcagcgagccccaggatgacgactacctctattgtgataagtgccagaacttc
ttcatcgacagctgtgctgctcatgggccccctaccttcgtaaaggacaatgtaatagag
aagggccattccaaccactcagccctcagcctgccccccgggctgagaattggaccttcg
agcatcccggaagctgggctaggtgtatggaatgaggcatccagtctgccactgggtctg
cactttggcccctacaggggccagatcacagaggatgaagaggcagccaacagcgggtac
tcctggctgatcaccaaggggagaaactgctatgagtatgtggatgggaaggatgaatct
caggccaactggatgaggtatgtgaactgtgcccgggatgacgaggagcagaacctggta
gcctttcagtaccacaggcagatcttctaccgaacctgcaaggttgtcagacctggctgt
gagctgctggtgtggtacggggacgagtacggccaggagctgggcatcaagtggggcagc
aggtggaagaaggagctctcagcagggaaaggtnggcaccactgtggttccttgaacaaa
ggagagaaatcattccccctgagaattttcatattccaactctcaagtagagtcacgtgc
agtctaaagccacaaaaccaaagtcagagatccatccttgtccctcatgctctctggcct
tctccagtcagaaattcctcagtcaacatgtggatcgcagtcacccctctcagatcttcc
caggaacatctgcaagaaaaaacctcaaactagaggattcctatccaagggatcctcttc
aagaacagcatcatcctgatccacacagctggaatgacgaaactggaggtcaagaagtca
aaggaagatccacaggagccatgcgggaagagtcctgcggaagatgtcctcacccagacc
acatcagggcttctgcgacgagatgcacaacagagacctaggcttgtgctttgtccccag
ttcctggcctgtagctcctaa
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