Sciurus carolinensis (gray squirrel): 124983783
Help
Entry
124983783 CDS
T08117
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03020
RNA polymerase
ncar04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124983783
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
124983783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124983783
Enzymes [BR:
ncar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124983783
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
124983783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
124983783
NCBI-ProteinID:
XP_047407303
EnsemblRapid:
ENSSCRG00010005655
LinkDB
All DBs
Position
4:161497422..161627979
Genome browser
AA seq
1133 aa
AA seq
DB search
MDVLAEEFGNLTPEQLAAPIPTVEEKWRLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKVTSDADPMWYLKYLNIYVGLPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILI
QEQLSKNRIIVEADRKGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIF
KAMGVESDQEIVQMIGTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWGGG
PKKTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNKVDDRDYYGNK
RLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPKQRAAQFDVVKHMRQDQITNGMVNAIS
TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLC
PSDTPEGEACGLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVF
LNGNILGVIRDHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVK
KQKPAVTNKHMEELAQGYRNFEDFLHESLVEYLDVNEENDCNIALYEHTINKDTTHLEIE
PFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMV
KTKTIELIEFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLK
RYTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENKQVLVNKSMPTVTQIPL
EGSNVPQQPQYKDVPITYKGATDSYIEKVMISSNAEDAFLIKMLLRQTRRPEIGDKFSSR
HGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHY
GTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKM
HARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVC
GQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSKYNE
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgctagcggaggagtttggaaacctaaccccggagcagctggcagcgccgatc
ccgactgtagaggaaaaatggaggctgcttccagcatttttaaaggtgaaaggccttgtg
aaacagcatatagactcatttaactattttattaatgtagagataaagaagataatgaaa
gccaatgaaaaagttacaagtgatgctgaccccatgtggtacttaaaatatcttaatatc
tatgttgggcttcctgatgttgaagaaagcttcaatgtaactagaccagtgtctcctcat
gagtgccgtttgagggacatgacctattctgcccccattacggtggatattgagtatacc
cgaggcagccaaaggatcatccgaaatgccttgcccattggcaggatgcccataatgctt
cgaagttcaaattgtgttcttacagggaaaacaccggcagaatttgccaaactgaatgaa
tgtccattagacccaggtggctacttcattgttaaaggagttgaaaaagtcattcttatc
caagagcagctatccaagaacagaatcattgtggaggcggataggaaaggggccgtggga
gcttccgttaccagctccacccatgagaagaaaagtaggaccaacatggctgtgaagcag
gggcggttttacctgaggcataacactttgtctgaggatatacccattgtcatcatattt
aaggccatgggtgttgagagtgaccaggaaattgtgcagatgattggaacagaggagcac
gtgatggctgcatttgggcccagtttggaggagtgccagaaagctcagattttcacacag
atgcaggcattaaaatatataggaaataaagtaagaaggcaaaggatgtggggaggtgga
ccaaagaaaaccaaaatagaagaagcaagagagctcctggcttctaccatcctgacccat
gtgccagttaaggaattcaattttcgagccaaatgtatctatactgcagtgatggtgcga
agagtaattctggcccaaggtgataataaagttgacgacagagactattatggtaacaag
cggttggaattggcaggacagcttttatctcttctttttgaagatttgttcaaaaaattt
aattctgaaatgaagaagattgcagaccaggtgattcctaaacaaagagcagcccagttt
gatgttgtgaaacacatgcgccaagaccagattaccaatggcatggtgaatgccatttcc
accggaaattggtctctaaagagatttaaaatggaccgccaaggtgtgacccaagtcctg
tctcgcttatcatatatatctgcactgggcatgatgacaagaatctcttcccagtttgaa
aaaaccagaaaagtgagtggtcctcgttccctccagccatctcagtggggaatgctctgt
ccttcggacactcctgaaggagaggcctgtggtttggttaaaaatttggcccttatgaca
catatcacaaccgacatggaagatggacccattgttaaattagccagcaatctgggagtg
gaagatgtgaatttactatgtggagaagagctctcttacccaaatgtgtttcttgttttt
ctcaatggtaacatcttgggtgtcattcgagatcataaaaagctagtgaatacattccga
ctgatgcgaagagcaggatatatcaatgaattcgtttccatctcaacaaatcttacagat
cggtgtgtttatatatcctctgatggaggaaggctgtgcagaccttacataattgttaag
aaacagaagccagcagtcacgaataagcacatggaagagctggctcaggggtacaggaat
tttgaagatttcttacatgagagtctggtagaatatttagatgtgaatgaagaaaacgat
tgtaacattgcactctatgaacatacaattaataaagataccacccacttggagattgaa
cccttcactcttcttggcgtctgtgctggcctgatcccttatcctcatcataaccagtcc
ccaagaaacacctatcagtgtgccatggggaaacaagccatgggtaccattggatacaac
cagagaaacagaattgatactctcatgtatctgctagcatatccacaaaagcccatggtt
aaaacaaaaactattgagttgatagaatttgagaaattgcctgctggacagaatgcaaca
gttgctgtgatgagttacagtggttatgatattgaagatgcgcttgttttaaacaaggcc
tccttggacagaggctttggacgttgcctcgtgtataaaaatgctaagtgcacattgaaa
cggtacaccaatcagactttcgataaagtgatgggacccatgttggatgccgctacaagg
aagcccatctggcgacatgaaattttagatgcagatggtatttgttctccaggtgaaaaa
gtagaaaacaaacaagtgcttgtaaacaagtccatgcccacagtgactcagattcctttg
gaaggaagtaatgtgccacagcaaccacagtacaaagatgtgcccataacttacaaaggg
gcaacagattcttacattgagaaggtgatgatatcgtccaatgctgaagatgcctttctg
attaaaatgctgctgagacagacaaggcgaccagagatcggagacaaattcagcagtcgt
catggacaaaaaggtgtttgtggtttgatcgtcccccaggaggacatgccgttttgtgat
tctggcatctgtccggacatcataatgaacccacatggcttcccatcgagaatgacggtg
ggaaagttaattgagctgctggccggcaaagcgggtgtgttagatggcaggttccactat
ggcactgcattcggagggagtaaagtgaaggacgtgtgtgaggacctcgttcgccatggt
tataactacttagggaaggactatgtcacatctggcatcacaggcgagcccttagaagcc
tacatctattttggccctgtgtactatcagaaactgaaacacatggtgctggataaaatg
catgcccgggcccggggaccacgagccgtccttactaggcagcccactgaagggcgatct
cgtgatggtggcttgcgtcttggagaaatggaacgtgactgtttaattggctatggagcc
agtatgcttctgctagagagactgatgatttcaagtgatgcctttgaggttgatgtctgt
gggcagtgtggacttctggggtactccggctggtgccattactgcaagtcatcgtgccac
gtgtcttccctccgcattccgtatgcctgcaagctgctcttccaggaactacagtccatg
aacatcatccccagattaaaactgtccaagtacaatgagtga
DBGET
integrated database retrieval system
