Sciurus carolinensis (gray squirrel): 124986583
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Entry
124986583 CDS
T08117
Name
(RefSeq) adenomatous polyposis coli protein isoform X1
KO
K02085
adenomatosis polyposis coli protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04310
Wnt signaling pathway
ncar04390
Hippo signaling pathway
ncar04550
Signaling pathways regulating pluripotency of stem cells
ncar04810
Regulation of actin cytoskeleton
ncar04934
Cushing syndrome
ncar05010
Alzheimer disease
ncar05022
Pathways of neurodegeneration - multiple diseases
ncar05165
Human papillomavirus infection
ncar05200
Pathways in cancer
ncar05206
MicroRNAs in cancer
ncar05210
Colorectal cancer
ncar05213
Endometrial cancer
ncar05217
Basal cell carcinoma
ncar05224
Breast cancer
ncar05225
Hepatocellular carcinoma
ncar05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124986583
04390 Hippo signaling pathway
124986583
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
124986583
09142 Cell motility
04810 Regulation of actin cytoskeleton
124986583
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124986583
05206 MicroRNAs in cancer
124986583
09162 Cancer: specific types
05210 Colorectal cancer
124986583
05225 Hepatocellular carcinoma
124986583
05226 Gastric cancer
124986583
05217 Basal cell carcinoma
124986583
05213 Endometrial cancer
124986583
05224 Breast cancer
124986583
09172 Infectious disease: viral
05165 Human papillomavirus infection
124986583
09164 Neurodegenerative disease
05010 Alzheimer disease
124986583
05022 Pathways of neurodegeneration - multiple diseases
124986583
09167 Endocrine and metabolic disease
04934 Cushing syndrome
124986583
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncar01009
]
124986583
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124986583
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124986583
Protein phosphatases and associated proteins [BR:
ncar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124986583
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
124986583
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
124986583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm_APC_u3
APC_basic
EB1_binding
APC_r
APC_u5
APC_u14
APC_rep
APC_u15
APC_u9
SAMP
Arm
APC_u13
APC_15aa
Suppressor_APC
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
124986583
NCBI-ProteinID:
XP_047410967
EnsemblRapid:
ENSSCRG00010014143
LinkDB
All DBs
Position
6:96181459..96319237
Genome browser
AA seq
2870 aa
AA seq
DB search
MYVSLGSGPVAALPASVPSATLGSWSSSGGRGCVRPKSPGIARASGRRASVWQEVLKQLQ
GSIEDEAMASSGQIDLLERLKELTLDSSNFPGVKLRSKMSLRSYGSREGSVSSRSGECSP
VPMGSFPRRGFVNGSRESTGYLEELEKERSLLLADLDKEEKEKDWYYAQLQNLTKRIDSL
PLTENFSLQTDMTRRQLEYEARQIRVAMEEQLGTCQDMEKRAQRRIARIQQIEKDILRIR
QLLQSQATEAERSSQNKHEAGSHEAERQNEGQGVAEINMAASGSGQGLTTRMDHETASVL
SSGSTHSAPRRLTSHLGTKVEMVYSLLSMLGTHDKDDMSRTLLAMSSSQDSCISMRQSGC
LPLLIQLLHGNDKDSVLLGNSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHLLEQ
IRAYCETCWEWQEAHEQGMDQDKNPMPAPVEHQICPAVCVLMKLSFDEEHRHAMNELGRK
ATRGISSQELGQGLSGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVA
NKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALME
CALDVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIES
GGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKD
QEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMANRPAKYKDANIMSPGSSLPSLHV
RKQKALEAELDAQHLSETFDNIDNLSPKASHRNKQRHKQNLYGDYVFDTNRHDDNRSDNF
NTGNMTVLSPYLNTTVLPSSSSSRGSLDSSRSEKDRSLERERGIGLSSYHPTTENPGTSS
KRGLPISTTAAQIAKVMEEVSAIHTSQEDRSSGSTTELHCVTDERNAVRRSSTAHTHSNT
YNFTKSENSNRTCSMPYAKLEYKRSSNDSLNSVSSSDGYGKRGQMKPSIESYSEDDESKF
CSYGQYPADLAHKIHSANHMDDNDGELDTPINYSLKYSDEQLNSGRQSPSQNERWARPKH
IIEDEIKQNEQRQSRSQNTTYPVYTENTDDKHLKFQPHFGQQECVSPYRSRGTSGSETNR
VGSGHGINQNVNQPLCQEDDYEDDKPTNYSERYSEEEQHEEEERPTNYSIKYNEEKHHVD
QPIDYSLKYATDISSSQKPSFPFSKSSSAQNTKTEHISSNSEKASTPSSNGKRQNQLHPS
SAQSRNGQTQKATTCKVPSINQETIQTYCVEDTPICFSRCSSLSSLSSAEDEIGCDQTTQ
ETDSANTLQIAEIKENSVTRSTEDPVSEVATVSQHVRTKPSRLQASSLSSESTRHKAVEF
SSGAKSPSKSGAQTPKSPPEHYVQETPLMFSRCTSVSSLDSFESRSIASSVQSEPCSGMV
SGIISPSDLPDSPGQTMPPSRSKTPPPPPQTVQTKREVPKNKVPTTEKRESGPKQAAVNA
AVQRVQVLPDADTLLHFATESTPDGFSCSSSLSALSLDEPFIQKDVELRIMPPVQENDNG
NETEPEQPEESNENQDKEAEKTVDSEKDLLDDSDDDDIEILEECIISAMPTKSSRKAKKL
AQTASKLPPPVARKPSQLPVYKLLPSQNRLQAQKHVSFTPGDDMPRVYCVEGTPINFSTA
TSLSDLTIESPPNELATGEAVRAGMQSGEFEKRDTIPTEGRSTDEDQRGKTSSVTMPELD
DSKTEEGDILAECINSAMPKGKSHKPFRVKKIMDQVQQASVSSSGTNKNQIDSKKKKPTS
PVKPIPQNTEYRTRVKKNTDSKNNLNAEQTFSDNKDSKKQNLKTNSKDFNDKLPNNEDRV
RGSFTFDSPHHYTPIEGTPYCFSRNDSLSSLDFDDDDVDLSREKAELRKGKDNKESEAKV
TSHAEPTSSQQSSNKSQAVTKHPISRGQSKPILQKQPTFPQSSKDIPDRGAATDEKLQNF
AIENTPVCFSRNSSLSSLSDIDQENNNNKESEPIKETVPPASQGEPNKPQASGYAPKSFH
VEDTPVCFSRNSSLSSLSIDSEDDLLQECISSAMPKKKRPSRLKGDNEKHSPRNMGGILA
EDLTLDLKDIQKPDSEHGLSPDSENFDWKAIQEGANSIVSSLHQAAAAACLSRQASSDSD
SILSLKSGISLGSPFHLTPDQEEKPFTGNKGPRILKPGEKSTLETKKIESENKGIKGGKK
VYKSLITGKVRSNSEISSQMKQPLQTNMPSISRGRTMIHIPGVRNSSSSTSPVSKKGPPL
KTPASKSPSEGQAATTSPRGAKPSVKSELSPVTRQTSQIGGTNKGSSRSGSRDSTPSRPA
QQPLTRPMQSPGRNSISPGRNGISPPNKLSQLPRTSSPSTASTKSSGSGKMSYTSPGRQM
SQQNLTKQTGLSKNTSSIPRSESASKGLNQMNNSNGSSKKVELSRMSSTKSSGSESDRSE
RPVLVRQSTFIKEAPSPTLRRKLEESASFESLSPSSRPDSPTRSQAQTPVLSPSLPDMSL
STHSSVQAGGWRKLPPNLSPTIEYNDGRPTKRHDIARSHSESPSRLPINRSGTWKREHSK
HSSSLPRVSTWRRTGSSSSILSASSESSEKAKSEDEKHVNSTSGTKQTKENQVSTKGTWR
KIKESEISPTNITSQNTSLGATNGAESKTLIYQMAPAVSKTEDVWVRIEDCPINNPRSGR
SPTGNTPPVIDSVSEKGNPNVKDLKDNQGKQNVGNGSASMHTMGLENRLNSFIQVDAPDQ
KGTETKQGQSNPVPAAETSESSVAERTPFSSSSSSKHSSPSGTVAARVTPFNYNPSPRKS
SADSTSARPSQIPTPVNNTTKKRDSKTDSTESSGTQSPKRHSGSYLVTSV
NT seq
8613 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtctccctgggctcgggtcctgtagccgctttgcctgcttctgtaccatccgca
actctcgggtcctggagctccagcggcggcaggggctgtgtccggccgaagagcccaggc
atcgcccgtgcttctggccgccgggcgagcgtctggcaggaagtacttaaacaactacaa
ggaagtattgaagatgaagctatggcttcttctggacagattgatttattagagcgtctt
aaagaacttaccttagatagcagcaattttcctggagtaaaattacggtcaaaaatgtcc
ctccgttcttatggaagccgggaaggatctgtatcaagtcgttcgggagagtgcagtcca
gttcctatggggtcatttccaagaagagggtttgtaaatggaagcagagaaagtactgga
tatttagaagaacttgaaaaagagagatcattactccttgctgatcttgacaaagaagaa
aaggaaaaagactggtattatgctcaacttcagaatctcactaaaagaatagatagcctt
cctttaactgaaaatttttccttacaaacagatatgaccagaaggcaattggaatatgaa
gcaaggcaaatcagggttgcaatggaagaacaactgggtacttgccaagatatggaaaaa
cgagcacagcgaagaatagctagaattcaacagatagaaaaggacatactgcgtattcga
caacttttacagtcccaagcgacagaagcagagagatcatctcagaacaagcatgaagct
ggctcacatgaagctgagcggcagaatgaaggtcaaggagtggcagaaatcaacatggca
gcttctggtagtggtcagggtttaactacacgcatggaccatgaaacagccagtgttttg
agttctggtagtacacactctgctcctcgaagactgacaagtcatttgggaactaaggtg
gaaatggtgtattcattgttgtcaatgcttggtactcatgataaggatgatatgtcacga
actttgctagctatgtctagctcccaagacagctgtatatccatgcgacagtctggatgt
cttcctctcctcatccagcttttacatggcaatgacaaagactctgtattgttgggaaat
tcccggggcagtaaagaggctcgggccagggccagtgcagcactccacaacatcattcac
tcacagcctgatgacaagagaggcaggcgtgaaatccgagtccttcatcttttggaacag
atacgagcttactgtgaaacctgttgggagtggcaggaagcccatgaacaaggcatggac
caggacaaaaatccaatgccagctcctgttgaacatcagatctgtcctgctgtttgtgtt
ctaatgaaactttcttttgatgaagagcatagacatgcaatgaatgaacttggtaggaag
gctacccggggcatttcatcacaggagctagggcaggggctttcagggggactacaggcc
attgcagaattattgcaagtggactgtgaaatgtatgggcttactaatgaccactacagt
attactttaagacgatatgctggaatggctttgacaaacttgacttttggagatgtagcc
aacaaggctacactatgctctatgaaaggctgcatgagagcacttgtggcccaactaaaa
tctgaaagtgaagacttacagcaggttattgcaagtgttttgaggaatttgtcttggcga
gcagatgtaaatagtaaaaagacattacgggaagttggaagtgtaaaagcgttgatggaa
tgtgctttggatgttaaaaaggaatcaaccctcaaaagcgtactgagtgccttatggaat
ttgtcagcacattgcactgagaataaagctgatatatgtgctgtagatggtgcgcttgcg
tttttggttggcactctcacttatcggagccagacaaatactttagccattattgaaagt
ggaggtgggattttgcggaatgtatccagcttgatagctacaaatgaggaccacaggcaa
atcctaagagagaacaactgcctacaaaccttgttacagcacttgaaatctcacagtttg
acaatagtcagtaatgcatgtggaactttgtggaatctctcggcaagaaatcctaaagac
caggaagcattatgggacatgggggctgttagcatgctcaagaacctcattcattcaaag
cacaaaatgattgctatgggaagtgctgcagctttaaggaatctcatggcaaatagacct
gcaaaatataaggatgccaatattatgtctcctggttcaagcttgccatctcttcatgtt
aggaaacaaaaagccctagaagcagaattagatgctcagcatttatcagaaacttttgac
aatattgacaatttaagtcctaaggcatctcatcgtaataagcaaagacacaagcaaaat
ctttatggtgactatgtttttgacaccaatcgacatgatgataataggtcagacaatttt
aatactggaaatatgactgttctttcaccatatttaaatacaacagtattgcccagctcc
tcttcatcaagggggagtttagatagttcccgttctgaaaaagatagaagtttggaaaga
gagcgaggaattggcctaagtagttaccacccaacaacagaaaatccaggaacctcttca
aagcgaggtttgccaatctcaaccaccgcagctcagattgccaaagtcatggaagaagta
tcagccattcatacctcccaggaagacagaagttctggttctaccaccgaattacattgt
gtgacagatgaaaggaatgcagtaagaagaagctccactgcccacacacactcaaataca
tacaattttactaagtcagaaaattcaaataggacatgctctatgccttacgccaaattg
gaatataagagatcttcaaatgatagtttaaatagtgtcagtagtagtgatggttatggt
aaaagaggtcaaatgaaaccttcaattgagtcctattctgaagatgatgaaagtaaattt
tgcagttatggtcagtatccagctgacctagcccataaaatacatagtgcaaatcatatg
gatgataatgatggagaactggatacaccaataaattatagtcttaaatattcagatgag
cagttgaactctggaaggcaaagtccttcacagaatgaaagatgggcaagaccaaaacac
ataatagaagatgaaataaaacagaatgagcagagacaatcaaggagtcaaaataccact
taccctgtatatactgagaacactgatgataaacaccttaagttccagccacattttggg
cagcaagaatgtgtttccccctataggtccaggggaaccagtggttcagaaacaaatcga
gtgggttctggtcatggaattaatcaaaatgtaaaccagcctttatgtcaagaagatgac
tatgaagatgataagccaaccaactatagtgaacgttactctgaagaagaacagcatgag
gaagaggagagaccaacaaattatagcataaaatataatgaagaaaagcatcatgtggat
cagcctattgattatagtttaaaatatgccactgacatttcttcctcacagaaaccctca
tttccattctcaaagagttcatctgcacaaaacactaaaactgaacacatctcttcaaac
agtgagaaggcatccacaccttcatccaatggcaagaggcaaaatcagctacatccaagt
tcagcacagagtagaaatggtcagactcaaaaagctaccacttgtaaagttccctctatc
aaccaagaaacaattcagacttactgtgtagaagacaccccaatatgtttttcaaggtgt
agttcattatcatctttgtcatcagcagaagatgaaataggatgtgatcagacaacacag
gaaacagattctgctaatactctgcaaatagcagaaataaaagagaacagtgtaactaga
tcaactgaagatcctgtaagtgaagttgcaacagtgtcacagcatgttagaaccaaaccc
agtcgactccaagcttccagtttatcttcagaatcaaccaggcacaaagctgttgaattt
tcttcaggggccaagtctccctctaaaagtggtgctcagacaccgaaaagtccaccagaa
cactatgttcaggagactccactcatgtttagcagatgtacttctgtcagttcacttgat
agtttcgagagtcgttccattgccagctctgttcagagtgaaccatgcagtggaatggta
agtggtattataagccccagtgaccttccagatagccctggacaaaccatgccaccaagc
agaagtaaaacccctcccccacctcctcagacagttcaaaccaagcgagaggtacctaaa
aataaagtacctactactgaaaagagagagagtggacctaagcaagctgctgtaaatgct
gcagttcagagggtccaggttcttccagatgctgatactttattacattttgccacagag
agtactccagatggattttcttgttcatctagcctgagtgccctgagcctcgatgaacca
tttatacagaaagatgtggagctaagaataatgcctccagttcaggaaaatgacaatggg
aatgaaacagaaccagagcagcctgaagaatcaaatgaaaaccaggacaaagaggcagaa
aaaactgttgattctgaaaaagatctgctagatgattcagatgatgatgacattgaaata
ttagaagaatgtattatttctgctatgccaacaaagtcatcacgcaaagccaaaaagcta
gcccagactgcttcaaaattacctccacctgtggcaaggaaaccaagtcagctgcctgtg
tacaaacttctgccatcacaaaacaggttacaggcacaaaagcatgttagttttacacca
ggagatgatatgccacgggtatattgtgtagaagggacacctataaacttttccacagct
acatctctaagtgatctaacaatagaatcccctccaaatgagttagccactggagaagcg
gttagagcagggatgcagtcaggcgaatttgaaaaacgagataccattcctacagaaggc
agaagtacagatgaggatcaaagaggaaaaacctcatctgtaactatgcctgaattggat
gacagtaaaacagaggaaggcgatattcttgcagaatgcattaattctgctatgcccaaa
gggaaaagtcacaagcctttccgtgtgaaaaagataatggaccaggtccaacaagcatct
gtgtcttcttctggaactaacaaaaatcagatagatagtaagaaaaagaagcctacttca
ccagtaaaacctataccacaaaacactgaatataggacacgtgtgaaaaagaatacagac
tcaaaaaataacctaaatgctgaacaaaccttttcagacaacaaagattcaaagaaacag
aacttgaaaactaattctaaggacttcaatgataagctaccaaataatgaagatcgagtt
agaggaagttttacttttgattcacctcatcattacacccctattgaaggaactccttat
tgtttttcacgaaatgattctttgagttctctagactttgatgatgatgatgttgacctt
tccagggaaaaggcagaattaagaaaggggaaagataataaggaatcagaagctaaagtt
accagccacgcagaaccaacatcaagtcaacaatcatctaataagtcacaagctgttaca
aaacatccaataagtcgaggccagtctaaacccatactgcaaaagcaacccacttttcct
cagtcatccaaagatataccagatagaggggcagcaactgatgaaaaattacagaatttt
gctattgaaaacacaccagtttgcttttctcgtaattcctctctaagttctctcagtgac
attgaccaagaaaacaacaacaacaaagaaagtgaacctatcaaagagactgtgcctcct
gcctcacaaggagaaccaaataaaccccaggcatcaggttatgctcctaaatcatttcac
gttgaggatactcctgtttgtttctcaagaaacagttctctcagttctcttagtattgat
tctgaagatgacctgttgcaggaatgtataagttctgcaatgccaaaaaagaaaaggcct
tcaagactcaagggtgataatgaaaagcacagtcccagaaatatgggtggcatattagct
gaagatttgacacttgatttgaaagatatacagaaaccagattcagagcatggtttatcc
cctgattcagaaaattttgattggaaagctattcaggaaggtgcaaattccatagtgagt
agtttgcatcaagctgctgctgctgcatgtttatctagacaagcttcatctgattcagat
tccattctttcactgaaatcaggaatctctctgggatcaccttttcatcttacacctgat
caagaggaaaaacccttcacaggaaataaaggcccacgaattcttaagcctggggagaaa
agtacattggaaacaaaaaaaatagaatctgaaaataaaggaatcaaaggaggaaaaaaa
gtttataaaagcttgattactggaaaagttcgatctaattcagaaatttccagccaaatg
aaacagccccttcaaacaaacatgccttcaatctctcgaggtaggacaatgattcatatt
ccaggagttcgaaatagctcctcaagtacaagccccgtttctaaaaaaggcccacccctt
aagactccagcctccaaaagccctagtgaaggtcaagcagccaccacttcccctagagga
gccaagccatcagtgaaatcagagttaagccctgttaccaggcagacttctcaaataggt
gggacaaataaagggtcttctagatcaggatcgagagattctactccttcaagacctgcc
cagcaaccattaactagacctatgcagtctccagggagaaactcaatttcgcctggtaga
aatggaataagccctcctaacaaattatctcaactccctagaacatcatcccctagtact
gcttcaactaagtcttcaggttctgggaaaatgtcatatacatcgccaggcagacagatg
agccaacaaaaccttaccaaacaaacaggcttatccaagaataccagtagtatcccaaga
agtgagtctgcctccaaaggactaaatcagatgaataatagcaatggatccagtaaaaag
gtagaactttctagaatgtcttcaactaaatcaagtggaagtgaatctgatcgatcagag
agacctgtattagtacgtcagtctacttttatcaaagaagctccaagcccaaccttaagg
agaaaattggaggaatcagcttcgtttgaatctctttctccatcttctagaccagattct
cccactaggtctcaggcacaaacaccagttttaagcccttcccttcctgatatgtctctc
tctacacactcatctgttcaggctggtggatggcgaaaacttccacccaatctcagtcct
actatagaatataatgatggaagaccaacaaagcgtcatgacatagcacgctcccattct
gaaagtccttccagacttccaatcaacagatcaggaacctggaaacgtgagcatagcaaa
cattcatcatcccttcctcgagtaagcacttggagaagaactggaagctcgtcttcaatt
ctttctgcttcatcagagtccagtgaaaaagcaaaaagtgaggatgaaaaacatgtaaac
tctacttcagggacaaaacaaactaaagaaaaccaagtatccacaaaaggaacatggaga
aaaataaaagaaagtgaaatttctcccacaaatattacttctcagaacacttccttaggt
gctacaaatggtgctgaatcaaaaactctaatttatcagatggcacctgctgtttctaaa
acagaggatgtttgggtgagaattgaggactgtcccattaacaaccctagatccggaagg
tctcccacaggtaatactcccccagtgattgatagtgtttcagaaaagggaaatccaaat
gtgaaagatttaaaagataatcagggaaaacaaaatgtgggtaatgggagtgcctccatg
cacaccatgggtttggaaaaccgcctgaactcctttattcaggtagatgccccagaccaa
aaaggaactgagacaaaacaaggacaaagtaatcctgttcctgcagcagagaccagtgaa
agctctgtagcagagcgtaccccttttagttcaagcagctcaagtaaacacagttcacct
agtggaactgttgctgccagagtgactccttttaattacaacccaagtcctaggaaaagc
agcgcagatagcacttcagctcggccatctcagatcccaacaccagtgaataacaccacc
aagaaacgagattcaaaaactgacagcaccgaatccagtggaactcaaagtcctaagcgc
cattctgggtcttaccttgtgacatctgtttaa
DBGET
integrated database retrieval system
