Sciurus carolinensis (gray squirrel): 124987672
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Entry
124987672 CDS
T08117
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00310
Lysine degradation
ncar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
124987672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124987672
03036 Chromosome and associated proteins [BR:
ncar03036
]
124987672
Enzymes [BR:
ncar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
124987672
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
124987672
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
124987672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
124987672
NCBI-ProteinID:
XP_047412951
EnsemblRapid:
ENSSCRG00010008525
LinkDB
All DBs
Position
6:complement(116061548..116160484)
Genome browser
AA seq
600 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPAYLQHWQQLFPHGGGGGPLKGSGAAGPLGAPQPLQPPPPPPPP
PPPPERPEPPPDSLRPRPASLSSASSTPASSSTSASSASSCAAAAAAAAAAALAGLSALP
VAQLPVFAPLAAAAVAAESLPPKDLCLGTVSGPGPTKCGGSSGDSRGVPRFRCSAEELDY
YLYGQQRMEIIPLNQHTSDPNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSAAAAAPPP
ELPEWLRDLPREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLPPEKVQAGAVRNT
QHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRACIDIP
RGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPSTVMEAMCRQDALQPFNKSSKLSPATQ
QRSVVFPQTPCSRNFSLLDKSGPIESGFNQINVKNQRVLASPTSTSQLHSEFSDWHLWKC
GQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCG
RAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPESIEVD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccgggagatcccggcggctcggccttcctcaaagtggacccagcctacctg
cagcactggcagcaactcttccctcacggaggcggcggcggcccgctcaaaggcagcggt
gccgctggtcccctgggcgcgcctcagcccctgcagccgcctccgccgccgccgccgcca
ccgccgccgccagagcgccccgagcctcctccggacagcctgcgtccgcggccagcttcg
ctttcctcggcttcgtccaccccggcttcttcatccacctcagcctcttctgcctcctcc
tgcgctgctgccgctgcagccgccgccgccgccgcgctggcgggtctctcggctctgccc
gtggcgcagctgccagtgttcgcgcctctagccgctgccgctgtggccgcggagtcacta
cccccaaaagacttgtgccttggcactgtctcgggcccaggacccaccaagtgtggcggc
agcagcggggatagccggggcgtcccgcgcttccgctgcagcgccgaggagctggactat
tacctgtatggccagcagcgcatggagatcatcccgctcaaccagcacaccagcgacccc
aacaaccgttgcgatatgtgcgcggacaaccgcaacggcgagtgccccatgcacggcccg
ctgcactcgctgcgccggctcgtgggcaccagcagcgccgcggccgccgcacctccaccc
gagctgcctgagtggcttcgggacctgccacgggaagtgtgcttgtgcaccagcaccgtg
ccgggcctggcgtatggcatctgcgcggcgcagaggatacagcagggtacctggattggg
cccttccagggcgtgctcctgcccccggagaaggtgcaggcgggcgcggtgaggaacacg
cagcatctctgggagatatatgatcaagatgggacactacagcactttattgatggtggg
gaacctagtaagtcgagctggatgaggtatatccgatgtgcaaggcactgcggagaacag
aatctaacagtagttcagtacaggtcgaatatattctaccgagcctgtatagatatcccc
aggggcaccgagcttctggtgtggtacaatgacagctatacgtctttctttgggatcccc
ttacaatgcattgcccaggatgaaaacttaaatgtcccttcaactgtaatggaagccatg
tgccgacaagacgccctgcagcccttcaacaagagcagcaaactctcccctgccacccag
cagcgctccgtcgttttcccacagactccatgcagcagaaacttctccctcctggataag
tccgggcccattgaatcaggatttaaccaaatcaacgtgaaaaaccagcgagtcctggcc
agcccgacttccacaagccagctccactcggagttcagtgactggcatctctggaaatgc
gggcagtgctttaagactttcacccagcggatcctcctccagatgcacgtgtgcacacag
aacccagacagaccctatcaatgtggccactgctctcagtccttctcccagccttctgaa
ctgaggaaccacgtggtcactcactccagtgaccggcctttcaagtgcggctactgtggc
cgtgcctttgcgggagccaccactctcaacaaccatatccgaacccacactggagaaaag
cccttcaagtgcgagaggtgtgagaggagcttcacgcaggccacccagctgagccgacac
cagcggatgcccaatgagtgcaagccaataacggagagcccagaatcaatcgaagtggat
taa
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integrated database retrieval system
