Sciurus carolinensis (gray squirrel): 124991282
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Entry
124991282 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: hyaluronidase PH-20-like
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00531
Glycosaminoglycan degradation
ncar01100
Metabolic pathways
ncar04142
Lysosome
Module
ncar_M00076
Dermatan sulfate degradation
ncar_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
124991282
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
124991282
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
ncar02042
]
124991282
00536 Glycosaminoglycan binding proteins [BR:
ncar00536
]
124991282
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ncar00537
]
124991282
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
124991282
Bacterial toxins [BR:
ncar02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
124991282
Glycosaminoglycan binding proteins [BR:
ncar00536
]
Heparan sulfate / Heparin
Enzymes
124991282
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ncar00537
]
Enzymes
124991282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
124991282
NCBI-ProteinID:
XP_047418061
EnsemblRapid:
ENSSCRG00010008982
LinkDB
All DBs
Position
8:complement(29428101..29434382)
Genome browser
AA seq
529 aa
AA seq
DB search
MGVLTWNHLFVGSFVEANGASRTVFISLLIPCCLTLDFSAPPLIPNMPFLWAWNAPTEAC
TGKFDEPLDMSLFSLIGSPKKGITGQGVTIFYTDRLGYYPHIDKTDTSVHGGIPQLGSLQ
KHLEKARKDILFYIPVDNMGLAVIDWEDWRPTWERNWSPKTIYRKKSIELVQQQNLRLNN
TEATKIAKKEFETAGKKFMEETLKLAKSIRPNHFWGFYLFPDCYNHNYKKSHYTGACPDI
EKKRNDDLHWLWKESTALYPSIYLNSNLQSSSLAALFARHRVQEAIRVSKMINAKNPLPV
FVYTRLVFTDLTLQFLSQVDLVNTVGETIALGASGMVIWGTLSLARSMKSCLNLQDYMKI
TLNPYLINVTLAAKMCSQVLCREKGVCIRKNWNSDDYLHLNPSNLAIQIGQNGKYIIHGK
PTLEDLQHFSEKFHCSCYTDLNCEQKSDLDTIKTINVCAVEDVCIDTSLNPEPSNRLPLW
NRAVLPKMRRSSEPFATSAATVSPWVPRNDVSGGLLILYMYSQHLKYLA
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgctaacttggaaccatctatttgttgggagctttgtggaggccaatggagca
tcccgtacagtgttcatctcccttctgattccatgttgcctgactctggatttcagtgcc
ccacctcttatcccaaatatgcctttcctctgggcctggaatgctccaactgaagcttgt
actggaaagtttgatgagccgctagatatgagcctcttctctttaataggaagtcccaag
aaaggtatcacagggcaaggtgttacaatattttatacggacagacttggctactatcca
cacatagataagacagacacaagtgtgcatggaggaatcccccagctggggtccttacaa
aagcatttggaaaaagctaggaaagacattttgttttacataccagtagacaacatgggc
ttggctgtcattgactgggaagactggaggcccacctgggaaagaaactggtcacctaag
actatctataggaaaaagtccattgagctggttcagcaacaaaatttacgacttaataac
acagaagccactaagatcgccaaaaaagagtttgaaacggcaggaaagaaattcatggaa
gagactttaaaactggcaaagtcgattcggccaaatcatttctggggtttttatcttttc
cctgattgttacaaccataattacaaaaaatcccattacactggagcttgccctgacata
gaaaagaaaaggaatgatgatctgcactggttgtggaaggaaagcactgccctttaccca
tccatttatttgaacagcaacttgcagtcatcctcgctagctgcactctttgcccgtcat
cgtgtgcaagaagccattagggtttctaaaatgattaatgctaaaaacccacttccggtt
tttgtatatacccgcctggtttttactgatcttactttgcaattcctttctcaggttgac
cttgtgaatacagttggcgagaccattgctctgggagcctctggaatggtaatatgggga
actcttagtttagcacggagtatgaagtcttgcttgaacctacaagattacatgaagatt
acactgaatccttacttaattaatgtaaccctagcagccaaaatgtgcagccaagtactc
tgcagggagaaaggagtgtgtattaggaaaaactggaattcagatgactatcttcacctc
aatccaagtaaccttgctattcaaattgggcaaaatggaaagtacataatacatgggaaa
cctacacttgaagatctacagcatttttctgaaaaatttcattgcagctgttataccgac
ttgaactgtgaacagaaatctgatttagataccattaagactattaatgtgtgtgctgtt
gaagacgtttgtatagacacctcgctaaacccagagcccagtaataggcttcccctttgg
aacagggcagtacttccaaaaatgagaagaagcagtgaacccttcgccacatctgctgca
acagtgtctccatgggttcctagaaacgatgtcagtggaggactcttaattctatacatg
tattcacagcatttgaaatatttggcatag
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