Sciurus carolinensis (gray squirrel): 124992302
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Entry
124992302 CDS
T08117
Name
(RefSeq) peroxisomal bifunctional enzyme-like
KO
K07514
enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3,2-trans-enoyl-CoA isomerase [EC:
4.2.1.17
1.1.1.35
5.3.3.8
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00071
Fatty acid degradation
ncar00280
Valine, leucine and isoleucine degradation
ncar00310
Lysine degradation
ncar00380
Tryptophan metabolism
ncar00410
beta-Alanine metabolism
ncar00640
Propanoate metabolism
ncar00650
Butanoate metabolism
ncar01100
Metabolic pathways
ncar01212
Fatty acid metabolism
ncar03320
PPAR signaling pathway
ncar04146
Peroxisome
Module
ncar_M00032
Lysine degradation, lysine => saccharopine => acetoacetyl-CoA
ncar_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
124992302
00650 Butanoate metabolism
124992302
09103 Lipid metabolism
00071 Fatty acid degradation
124992302
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
124992302
00310 Lysine degradation
124992302
00380 Tryptophan metabolism
124992302
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
124992302
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124992302
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
124992302
Enzymes [BR:
ncar01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
124992302
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
124992302
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
124992302
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
F420_oxidored
TrkA_N
2-Hacid_dh_C
UDPG_MGDP_dh_N
ApbA
GCN5L1
Motif
Other DBs
NCBI-GeneID:
124992302
NCBI-ProteinID:
XP_047418948
EnsemblRapid:
ENSSCRG00010022565
LinkDB
All DBs
Position
9:complement(55423541..55458962)
Genome browser
AA seq
723 aa
AA seq
DB search
MAEYLRLPQSLALIRLRNPPVNAISLAVHNGIKEGLKKAISDHTIKAIVISGENGIFCAG
ADIHSFSTPISSAFGLGSLVDEIQRYQKPVVAAIQGVALGGGLELALGCHYRIAHAEAHV
GFPEVTLGILPGARGTQLLPRLIGIPASLDLITSGRHILAGEALKLGILDEVVNSDPVEA
AIKFAQRILDRPLESRRILNKSVPSLPHMDTIFREAFAKMRKQHPGSLAQEACVRAVQAS
MKYPYEVGIKEEEELFQYLRGSGQARALQYAFFAEKKAIKWSTPSGASWKTASARPISSV
GVLGLGTMGRGIAISFARANIPVIAVESDQKQLEAAKKIIASSLEKEASKMQQSGQPWSG
PKLKFSSSMKELAGVDLVVEAVFEDMKLKKQVFAELSAVCKPEAFLCTNTSALDVDEIAS
STDRPHLVIGMHFFTPAHVMKLLEVIPSRHSSPTTIATVMNLSKKIRKIGVVVGNCHGFV
GNRMLAPYYNQTYFLLEEGSKPEEIDQVLEEFGFKMGPFQVSDLAGLDVGWKVRQGQGLT
GPALPPGTPARKRGNRRYCPIPDMLCESGRYGRKTGKGWYHYDKPLGRIHKPDPWLSKFL
SEYRETHHIEPRVISQDEIRERCLYALINEAFRILGEGMAAGPEHIDVIYLHGYGWPRHR
GGPMFYASTVGLPTVLEKLHKYYRQNPDIPQLEPSDYLKKLASQGNPPLKEWQRLAGPPS
SKL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtacttgcggctgcctcaatccctggcgctgatccgcctccgaaacccgccg
gtcaacgcgatcagtttggctgtacacaatggaataaaagaggggctaaagaaagccata
tcagaccatacgataaaagccattgtgatatctggagaaaatggaatattctgtgcaggt
gcagatatccacagcttcagcactcctatatcctctgcctttggattgggaagtttagta
gatgaaatacagagataccagaagcctgtagtggcagctatccaaggcgtggctttagga
gggggactggagctggccttgggctgtcactataggattgcccatgcagaggctcacgtt
ggctttccagaagtcacactaggaattcttcctggtgcaagaggaacccagcttcttccc
agactcattggaattcctgcttcacttgacttaattacctcaggaagacacattttggcg
ggtgaagcactcaagctgggtattctggatgaagttgtgaactcagacccagtagaagca
gcaatcaaatttgcccagagaattttagatcgacctctagaatcccgcagaatcttgaac
aagtcagtcccaagcttgccccatatggacaccattttcagggaagcctttgcaaagatg
aggaaacagcaccctgggtcccttgctcaggaggcttgtgtccgtgcagtccaggcctcc
atgaagtatccttatgaagtgggcatcaaggaggaagaggagctgtttcagtaccttcgg
ggatcagggcaggccagagccctgcaatatgctttctttgctgaaaagaaagcaattaag
tggtcgactccctctggggcctcatggaaaacagcatcagcaagacccatctcctcagtc
ggtgtccttggcttgggaacaatgggccgaggcattgccatttcttttgcaagggccaac
atccctgtgattgctgttgaatcagaccaaaaacagctcgaagcagcaaagaagatcata
gcttctagcttagaaaaggaagcatccaaaatgcagcagagtggccagccttggtcagga
ccaaaactcaagttcagttcatctatgaaggagcttgctggcgtagatttagtggttgaa
gcagtatttgaggatatgaagctgaagaagcaggtctttgctgaactgtcagccgtgtgc
aagcctgaagcctttttgtgcaccaatacttcagccctggatgtggacgagattgcttct
tccactgatcggcctcacttggtcattggcatgcacttcttcacaccagctcatgttatg
aagttgttagaagttattcctagccgacactcttcccccaccaccattgccactgttatg
aacctatccaaaaagattaggaagattggtgtggtggtaggcaactgccatggctttgtt
gggaatcgaatgctggctccttattataaccaaacgtatttcttgttagaagaaggtagc
aagccagaggagatagatcaggtgctggaggaatttggttttaaaatgggaccctttcaa
gtgtctgaccttgctgggttggatgtgggctggaaagttcgccaggggcaaggtcttact
ggacctgcattgcctcctggcactcctgcccgaaagcggggtaacagaagatactgcccc
attcctgatatgctctgtgaatcaggacggtatgggcgaaagacagggaagggttggtat
cactatgacaagccattgggaaggattcacaagcctgatccctggctttccaaatttttg
tcagagtacagagaaacccatcatattgaaccccgtgtcattagccaggatgagatccgt
gagcgctgcttgtatgcacttatcaatgaagcgttccgtatcttgggagaagggatggct
gctggcccagagcacatcgacgtcatctacttgcatgggtatggctggccaaggcacagg
ggtgggcccatgttctatgcttccacagttgggctgcccacagttctggagaagttgcac
aagtactacaggcagaatcctgatattccccaactggagcccagcgactatctgaaaaag
ctggcttcccagggaaaccctcctctgaaagaatggcaaaggttggcagggccccccagc
agtaaattgtga
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