Sciurus carolinensis (gray squirrel): 124992998
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Entry
124992998 CDS
T08117
Name
(RefSeq) cystathionine beta-synthase isoform X1
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00260
Glycine, serine and threonine metabolism
ncar00270
Cysteine and methionine metabolism
ncar01100
Metabolic pathways
ncar01230
Biosynthesis of amino acids
Module
ncar_M00035
Methionine degradation
ncar_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
124992998
00270 Cysteine and methionine metabolism
124992998
Enzymes [BR:
ncar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
124992998
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Motif
Pfam:
PALP
CBS
Motif
Other DBs
NCBI-GeneID:
124992998
NCBI-ProteinID:
XP_047420419
EnsemblRapid:
ENSSCRG00010009523
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Position
9:complement(138806475..138832816)
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AA seq
561 aa
AA seq
DB search
MPSETPQAEEGSAGCPHHLGKGSLERGPLGDKEAKEHLWIPPDTPSRCTWQLGRPVTDSP
HHHVTLTKSPKILPDVLRKIGNTPMVRINKIGKNAGLQCELLAKCEFFNAGGSVKDRISL
RMIEDAERAGTLRPGDTIIEPTSGNTGIGLALAAAVKGYRCIIVMPEKMSMEKVDVLRAL
GAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDATAEEILQQC
DGKLDMLVATAGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQTEQTFYEVE
GIGYDFIPTVLDRAVVDKWFKSSDQESFTFARMLIAQEGLLCGGSSGSAMAVAVKAAQDL
QEGQRCVVILPDSVRNYMSKFLSDKWMLQKGFLKEEDLSVKRPWWWHLRVQELSLSAPLT
VLPTVTCEHTITILREKGFDQAPVVEESGAILGMVTLGNMLSSLLAGKVQPSDQVSKVIY
KQFKPIRLTDTLGTLSHVLEIDHFALVVHEQIQSRDQAWSGVVGGPADHSNGKSSERQMV
FGVVTAIDLLNFVAAREQDGK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgccttcggagacaccccaggcagaagaggggtctgcagggtgcccccaccacttgggg
aaagggagccttgagaggggacctctaggggacaaggaggccaaggagcatctgtggatc
ccgcctgacacccccagcaggtgcacctggcagctgggcaggcctgtcaccgactccccg
catcaccacgtcactctgacaaaatctccaaaaatcttgccagatgttctgaggaaaatc
gggaacaccccgatggtcagaatcaacaagatcgggaagaacgccggcctccagtgcgag
ctcttggccaagtgtgagttcttcaacgcgggtggaagtgtgaaggaccgcatcagcctg
cggatgatcgaggacgccgagcgtgctgggactctgagacccggggacacaatcatcgag
ccgacgtctgggaacacagggatcgggctggcgctggccgcggctgtgaagggctatcgc
tgcatcatcgtgatgcccgagaagatgagcatggagaaggtggacgtcctgcgggccttg
ggggcggagatcgtgaggacacccaccaacgccaggtttgactccccggagtcccacgtg
ggggtggcgtggcggctgaagaacgagatccccaattctcacatcctggaccagtatcgc
aatgccagcaaccccctggctcactacgacgccaccgcggaggagatcctgcagcagtgt
gatggaaagctggacatgcttgtggctactgcgggcacgggcggtaccatcacgggcatc
gccaggaagctgaaggagaagtgtcctgggtgcagaatcattggggtggacccagaaggg
tccatcctcgcagaaccagaagagctgaaccagacggagcagacattctacgaggtggaa
gggattggctacgacttcatccccacagtgctggacagggcggtggtggacaagtggttc
aagagcagcgaccaggagtccttcacctttgcccgcatgctgatcgcacaggaaggactg
ttgtgtggcggcagctccggcagcgccatggctgtggctgtgaaggcggcgcaggatctg
caggagggtcagcgctgtgtggtcatcctgcccgactcagtgcgtaactacatgtccaag
ttcctgagtgacaagtggatgctacagaagggctttctgaaggaggaagacctctccgtg
aagaggccatggtggtggcacctgcgagttcaggagctgagcctgtcagcccctctgacc
gtgctgcccacggtcacctgtgagcacaccatcaccatcctccgtgagaagggcttcgac
caggcgcccgtggtggaggagtcaggggccatcctgggaatggtgactcttgggaacatg
ctgtcgtccctgcttgctgggaaggtgcagccttcagaccaggtctccaaagtcatctac
aagcagttcaaaccgatccgcctgacggacacgctgggcacgctctctcacgtcctggaa
atcgaccacttcgccctggtggtccacgagcagatccagtcacgggaccaggcctggtca
ggagtggtgggggggcctgcagaccacagcaatggcaagtccagtgagcggcagatggtg
ttcggggtcgtcaccgccattgacctgctgaacttcgtggcggcccgcgagcaggatggg
aaataa
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