Notothenia coriiceps (black rockcod): 104942472
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Entry
104942472 CDS
T04920
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04020
Calcium signaling pathway
ncc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
104942472
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104942472
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104942472
Ion channels [BR:
ncc04040
]
Ligand-gated channels
Glutamate (ionotropic)
104942472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
MatE
Motif
Other DBs
NCBI-GeneID:
104942472
NCBI-ProteinID:
XP_010766003
UniProt:
A0A6I9MRU8
LinkDB
All DBs
Position
Unknown
AA seq
949 aa
AA seq
DB search
DIGHAESYTKLCCKGFCIDILKKLSRTIKFSYDLYLVTNGKHGKLVRGTWNGMIGEVFYR
RADMAIGSLTINEERSEIIDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFV
MCLTVVAVTVFVFEYLSPVGYNRSLVSAKTPGGPTFTIGKSVWLLWGIVFNNSVPIENPK
GTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSDKKFQKPHEHYPPFRFG
TVPNGSTERNIRSNYPDMHMHMMKYNQKGVEEALESLKTGKLDAFIYDAAVLNYMAGKDE
GCKLVTIGSGKVFATTGYGIALQKNSRWKRLIDLALLQFLGDGDTQRLETVWLSGICQNE
KNEVMSSKLDIDNMAGVFYMLLVAMGLSMLVFAWEHLLYWKLRHSLRKSRKLDYMLAISR
GIYSCFKGVEEPGRSSGLAKPDLTSNYAQQNMLKMLRTAKDLVSTANVETSLDHATKTIE
HLSRHGGSLPVRIPQVATETVPGGFAYITENHCPLTPPLTAVTSLKLQRGVTRPTPLRYT
LPTRSSSCLYDRPLPVSSLSSPHLAMGEPLPHQHPHHYQTTGRLYVDPHPHSPFIPYNDL
QLPDIYASHPVSPHQNQQVHEGFSRRKRRSKSFQCEDGNVEGRKHRDQEKSNISPVYLSE
LKANHLQENHISAPSVDYMYSEEVKCPRVENYGSWPPEDMLLRGRRRHRRPSFLKATWGS
EQIRQMEESLSSLSSQSQSALPDLFPCMLTQTAPAKPYNPAQLRNNLCLPRNQAYLHIRE
DHRRPNGRKGQRMRYSHSAHLPTYGEAVQHGSGLGRGMVRRATSLLSRQYAHYLNSYPGL
PLYHGPLDLQHHRQASSSPVCQLLACGGGRCGSQRALLYQDSLYGAYGIYQGSQTGSEAL
ASQRAGGQSAGGQPAGGQPAGGQPAGGQPAGSPCVLRPWRRVSSLESEV
NT seq
2851 nt
NT seq
+upstream
nt +downstream
nt
tgacatcggccacgcggagtcctacaccaaactgtgctgtaagggcttctgcatagatat
cctgaagaaactgtcccgcaccatcaagttctcatatgacctctacttagtcaccaatgg
aaaacatggcaagctggtccgtggtacttggaacggcatgattggggaggttttctacag
gcgagctgacatggctattggctctctcactatcaacgaggagcgttcggaaataatcga
cttctccgtgccgtttgttgagacgggcattagtgtcatggtagcccgcagcaatggcac
agtttccccatctgcttttcttgagccctacagtccagcagtttgggtcatgatgtttgt
gatgtgcttgaccgtcgtggctgtgacagtttttgtgtttgaatacttaagtccagtcgg
atacaaccgcagtctggtcagcgccaaaactcctggtggcccaacgttcaccatcgggaa
gtcagtgtggctgctgtggggtattgtctttaacaactcggtccccattgaaaaccccaa
aggaacgaccagtaagatcatggtcctggtctgggccttctttgctgtcatcttcctggc
ttcctacactgccaacctggctgccttcatgatccaggagcaatatatcgacacagtgtc
tgggctttctgacaagaagttccagaaaccacatgagcattatcctccttttcgctttgg
gacggtcccgaacgggagcacagagaggaacatccgcagcaactaccccgacatgcacat
gcacatgatgaaatacaaccagaagggggtggaagaagctctagaaagcctgaagactgg
gaaactggacgctttcatctacgacgctgccgttttgaactatatggccgggaaggacga
gggctgcaagctggtgaccatcggcagcgggaaagtatttgccaccacaggatacggcat
cgctctgcagaagaactcccgctggaagcgtcttattgacctggctctgctgcagttcct
tggagacggagacacgcagcgcttggagacggtgtggttgtcgggcatctgtcagaacga
gaagaacgaagtgatgagcagcaagctggacattgacaacatggcgggagtcttctacat
gctgctcgtggccatgggcctcagcatgctggtctttgcctgggaacacttgctctactg
gaaactgagacactccctccgcaagtctcgcaaacttgactacatgttggccatcagtag
gggtatttatagttgtttcaagggagtagaggaacctgggcgttcatctggtttggccaa
acctgacctaacctccaactacgctcaacaaaacatgcttaagatgcttcgcactgccaa
ggacctggtctccactgccaatgttgagacgtctctggaccacgccaccaagaccataga
gcatttgagtcgtcatggcggcagcttgcctgttcgtattccacaagtggccacggagac
tgtaccaggaggatttgcctatattacggagaatcactgcccactaaccccacctttgac
cgctgttacctctctgaaactccagaggggtgtgaccaggccaacaccactacgctacac
gctcccaactcgctcttcttcatgtctgtatgaccggccacttcctgtgtccagcctcag
tagcccccatctggctatgggtgaaccactccctcatcaacaccctcaccactaccagac
cacaggtagactctatgtagacccccatcctcactcacccttcatcccctacaatgatct
ccaactacctgacatctacgcatctcacccggtctccccgcatcaaaaccagcaagtcca
tgagggcttctccagacggaaaagaagatctaaaagtttccagtgtgaggatgggaatgt
agaagggagaaaacacagggaccaggaaaagagcaacataagccccgtctatctgagtga
gctcaaagccaaccacctccaagaaaaccacatctccgcccccagcgttgactacatgta
ctcagaggaggtgaagtgtccgcgggtagagaactacggctcctggcccccggaggacat
gttgctcagaggtagacgaaggcaccgccgcccgtcattccttaaagcaacgtggggcag
cgagcagatacgtcagatggaggaatccctgtcatccctgtccagccaatcacaatctgc
cctgccggacctgttcccatgcatgcttactcagaccgcacctgcaaagccctacaaccc
tgcccaacttcgaaacaacctgtgcctcccacggaaccaggcctacctccacataagaga
ggaccataggaggcctaatgggcgtaaaggccagagaatgcgctactcccactccgccca
cctcccgacatacggagaggcagtgcaacatggcagtggtttagggcgggggatggtacg
cagagccaccagcttgcttagcagacaatatgcccactacctgaactcttatcctggact
accgctctaccacggccccctagacctgcagcaccacaggcaggcctccagcagtccagt
atgccagctgctggcttgtggtggtgggagatgtggaagccagcgagctctgctgtacca
ggacagtctatacggagcctatggcatctatcagggatcccagactggatcagaggccct
agcaagtcagcgagcagggggtcagtctgcagggggtcagcctgcagggggtcagcctgc
agggggtcagcctgcagggggtcagcctgcggggagcccctgcgtacttcgtccctggcg
gcgggtttccagtcttgagtctgaggtctaa
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