Notothenia coriiceps (black rockcod): 104944974
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Entry
104944974 CDS
T04920
Symbol
grin2b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04020
Calcium signaling pathway
ncc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
104944974 (grin2b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104944974 (grin2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104944974 (grin2b)
Ion channels [BR:
ncc04040
]
Ligand-gated channels
Glutamate (ionotropic)
104944974 (grin2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
104944974
NCBI-ProteinID:
XP_010768888
UniProt:
A0A6I9N037
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYYPGYQDFVNKVRSTIDNSFVGWELEE
VFLLDMSLEDGDSKIQNQLKKLQSPVILLYCTKEEASTIFEVAHSVGLTGYGFTWIVPSL
VAGDADIIPDVFPTGLISVSYDEWDYNIEARVRDAVAVIATATSTMMLDRGPHTLQKSSC
LGTPDKKGSNTGHSKEILKYLMNVTFEGRNLSFSEKGHQMFPKLVIILLDKDRQWDRVGK
WERGSLTMRYHVWPRFEEEREDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQLKL
TNQTGDSGIYIKRCCKGFCIDILKKIAKAVKFTYDLYLVTNGKHGKKVNGTWNGMVGEVV
LKNAHMAVGSLTINEERSQVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMM
FVMLLLVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQN
PKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQNPNEFSPPFR
FGTVPNGSTERNIRNNYRDMHTYMTSFHQKNVDEALYSLKSGKLDAFIYDAAVLNYMAGR
DEGCKLVTIGSGKVFASTGYGIAIQKHSGWKRAVDLAILMLFGDGDMEEFEALWLTGICH
NEKNEVMSSQLDVDNMAGVFYMLGAAMILSLLTFICEHWFYWQLRFCFMGVCTGQPAATF
TISRGIWSCIHGVQIEENKSTIDSPSDTMKKNMNNTHSNILRLLRTAKDMTAVPGVNGSP
HPALEYSHSARESTIYDIQEHRRSLVGHPADCKTAPPYLPEDNMFSDYISEVERTFGNLP
LKDSNLYQDHYLHHHPASALGMSGPVPNRPRSLGSTSSLEGGMFDCDSLGGGVAPIFTTQ
PRPSMTHRNTNKFDLIAGHAPADSDQGGFKGNNVYGRFSFKGGASSTGLIGGHDRYCGGG
GAGSGGDDGNIRSDVSDISTHTVTYGNLEGNNKRRKQYRDSLKKRPASAKCRREQDEIEL
SGLRRRAHHHTVHHHFPHGPQAHRTVSPPLERKRGGGGDKVNQNPFIPTFDDDQCLLHGG
KPYYIKKPQTQQQQQQLLNNSRGGGDFRGSMGTTSYLPASATAGVMSNVAPRFPNDLCLG
GVGGPMGNHHGASKLMPVARDTLGLGPGHRPFNGASNGHVYEKLSSIESDV
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgtttttccagttcggtccgtccatcgagcagcaggcctccgtcatgttgaacatcatg
gaggagtatgactggtacatcttctccattgtcaccacgtactaccctggctaccaggac
tttgtcaacaaggtccgaagcaccatcgataacagctttgtgggctgggagctggaagaa
gtgttcttgctggacatgtcattggaagacggagactccaagatccagaaccagctgaag
aaactgcagagtccggtgatcctgctctactgcaccaaggaggaggccagcaccatcttc
gaggtggctcactctgtgggcctcacagggtatggcttcacctggatcgtgccctcgctg
gtggctggagacgcagacatcatccccgacgtcttccccacagggcttatctctgtgtca
tatgacgaatgggactacaacatcgaggccagggtacgtgatgcagtggctgtcatcgca
acggcgacctccaccatgatgctggaccgggggccgcacaccctgcagaagtccagctgc
ctcgggactccggacaaaaagggctccaacactggccactccaaggaaatactgaagtac
ctcatgaatgtgacatttgaaggcagaaacctgtcatttagcgaaaagggtcatcagatg
tttcccaaactggtcatcattcttctcgacaaggacagacaatgggacagggttggcaag
tgggagagaggctccctgacgatgaggtaccatgtgtggcctcgcttcgaggaggagcgg
gaggaccacctgtccatcgtgactctggaggaggcgccgtttgtgattgtcgaggacgtg
gacccgctcagtgggacctgcatgaggaacactgtgccgtgccgaaaacagctaaaacta
accaatcagacgggggattcggggatttacatcaagcgctgctgcaaaggtttctgtatc
gacatcctgaagaagatcgccaaggcggtcaagttcacctacgacctctacctggtcacc
aacggcaaacatggcaagaaggttaatgggacatggaatggcatggttggggaggtggtg
ttgaagaatgctcacatggcagtgggttcgctcactattaacgaggagaggtcacaggtc
atcgacttctctgtgcctttcattgagacgggcatcagtgtcatggtctcccgtagcaac
ggcaccgtgtccccctccgcctttctcgagcccttcagtgctgatgtctgggtgatgatg
tttgtgatgttgctgttggtgtcggccgtggctgtgtttgtgtttgaatacttcagccca
gtgggttacaatcgctgcctggcagatgggcgagagcccggcggtccctccttcaccatc
ggaaaggccatctggttgctatggggtctggttttcaacaactccgtccctgtgcagaac
cccaaaggtaccaccagtaagatcatggtgtcagtgtgggccttcttcgctgtcatcttc
ctggcctcctacactgccaacctggcagccttcatgatccaagaggagtatgtggaccag
gtgtcgggcctgtcagataaaaagttccagaatccaaacgaattctcaccgccattccgg
ttcggcacggtgcccaacgggagcacagagcgcaacatccgcaacaactaccgggacatg
cacacttacatgaccagcttccaccagaagaacgtagacgaagcgctgtacagtctgaag
agcggcaaactggatgccttcatctacgacgctgcggtgctgaactacatggcgggccga
gacgaaggctgtaagctggtcaccatcggcagtggcaaggtgttcgcctccaccggctac
ggcatcgccatccagaaacactccggctggaaacgagccgtggacctggccatcctcatg
ctgtttggagacggtgacatggaggagttcgaggctctgtggctgacgggcatctgccac
aatgagaagaacgaggtgatgagcagccagctagacgtggacaacatggcgggcgtcttc
tacatgctcggggccgccatgattctgtcattactcactttcatctgtgaacattggttc
tactggcagctgcgtttctgcttcatgggcgtgtgcacgggacagcccgcggccaccttc
accattagcagaggtatctggagctgcatccatggggtacaaattgaggaaaacaagtca
accattgactcgccctcggacaccatgaagaagaacatgaacaacacccactccaacatc
ctgcggctgctccgcacggctaaggacatgactgccgtcccgggcgttaacggctctccg
cacccggcgctggagtacagccacagcgcgcgtgaatcgactatctatgatatccaggag
caccggcgcagcttggtaggtcaccctgccgactgcaagacagcgcctccctacctgcca
gaggacaacatgttcagtgactacatcagcgaggtggagaggacttttgggaacttgccc
ctgaaggacagcaacctgtaccaggaccattacctgcaccaccacccggcctcggctctg
ggtatgtccggccccgtgcccaacagaccgcgtagcttaggcagcactagctcgttggaa
ggtggcatgtttgattgcgacagtttagggggaggggtagcgcccatcttcaccacccag
ccccgcccctccatgactcacaggaataccaataagttcgacctgattgccggccacgcc
cctgcggactccgaccagggtgggttcaaggggaacaatgtgtacgggaggttttctttc
aaaggaggcgcatccagcacggggctcatcgggggtcatgaccggtactgtggtgggggt
ggggcaggctcagggggggatgatgggaacattcgctcagacgtttcggatatctcaacg
cacactgtcacctacggcaacctggagggcaacaacaagcggcgtaagcagtacagggac
agcctgaaaaagaggccagcttcggccaagtgcagacgggagcaggacgagatagagctg
agcggcctcaggaggagagcccaccaccacaccgtccaccaccacttcccccacgggcct
caggcacaccgcacggtctcacctcccctggagcggaagaggggaggaggaggggataag
gtgaaccagaaccccttcatcccaaccttcgatgatgaccagtgtctattacacggcggc
aaaccgtactacatcaaaaagccacagacgcagcaacagcagcagcaacttctcaacaac
agccggggaggaggggacttccgcggctccatgggaacgacttcctatttgcccgcgtcc
gccacagctggggtaatgtccaatgtggcccccaggttccccaacgatctgtgtctgggc
ggggtaggggggcccatggggaaccaccacggggccagcaagctaatgcctgtggccagg
gacactttgggtttggggccggggcatagacccttcaacggtgccagcaatggacacgtt
tatgaaaagctctccagcattgagtcagacgtctga
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