Notothenia coriiceps (black rockcod): 104953209
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Entry
104953209 CDS
T04920
Symbol
apc
Name
(RefSeq) LOW QUALITY PROTEIN: adenomatous polyposis coli protein
KO
K02085
adenomatosis polyposis coli protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04310
Wnt signaling pathway
ncc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
104953209 (apc)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
104953209 (apc)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncc01009
]
104953209 (apc)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncc03036
]
104953209 (apc)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncc04812
]
104953209 (apc)
Protein phosphatases and associated proteins [BR:
ncc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104953209 (apc)
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
104953209 (apc)
Cytoskeleton proteins [BR:
ncc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
104953209 (apc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
APC_r
Arm_APC_u3
SAMP
Arm
APC_15aa
Motif
Other DBs
NCBI-GeneID:
104953209
NCBI-ProteinID:
XP_010778423
UniProt:
A0A6I9NU77
LinkDB
All DBs
Position
Unknown
AA seq
1556 aa
AA seq
DB search
SSLIATNEAHRQILRDHGCLPTLLQHLKSHSLTIVSNACGTLWNLSARDAKDQEALWELG
AVGMLRNLIHSRHKMIAMGSAAALRNLMANRPARYKDASVVSPGAGAPSLHARKQKALFE
ELDAQQLSETFDNIDNLSPKAAHRKGRGCSGATGGGGPTRSYTNTPVLSSPKSADGLKRT
SEEPFARPVFPPSVRASSDSLNSVTSADGYGNRGKTKPSTEPFYSSDENGGNKCCVYRKY
PADLAHKIRSANHMADDDGGELDTPINYSLKYSDEQLNSGRQSPSHRGAAESEETSRWTP
GCGAAVTRLPKGTAWRPPRRSGMSPRQHQTTGEPAPEQPIDYSLKYGADVTRKPLFKPEE
STPPSAPPPPLSSANKLRPPPPTKRPPPKGSQEAPQTYCVEDTPICFSRGSSLSSLSSEE
EEEDGRKRRGGGSDYPTLPVSEKEEQQRQQKEAQSQTSSAAAAAAAASRGRRSHHHHHHV
TSSGARTPKSPPEPPYAQETPLMFSRCTSVSSLDSFSTSSIASSVRSSEPCSGMPSGVVS
PSDLPDSPGQTMPPSRAKTPPPPSSKQEKKKQEEESSADVMLHFATESTPHGFSRASSLS
ALSVDEPYIMAEMRKEEEEEANKERKERKEREEREEREDEEGQLDESDDDDDIEILEACI
KRAMPKSSRKPKKQQQQPAPRKPSQLPVYKLLPPQGRSQSQQRKDGPSEEVPRIYCVEGT
PLNFSTATSLSDLTIDSPPNEEAAPAAQPSNQSRGAGLRGAWPPEGDNGDDILAECISAA
MPKARPRKPVRAAPGEIQAPPPLQAPPPPPRPRLYSARSSRRRNRRPVKPMPPRAPYSIS
AATAAKAKPGFTFDSPHHYTPIEGTPCCFSRNDSLSSLDFDEDEGGEKDEEKRVKEEDGR
KRKQQTAAVVPRTKPAANLPDDRQKFCIEDTPVCFSRNSSLSSLSDIDQENNNKEFAAPP
PPEQGGTAGRKSPPLQEEQKPRPPASGYAPRAFHVEDTPVCFSRNSSLSSLSIDSEDDLL
QECISSAMPKKKKKGAAPPSLPKEEDEDDNGILAEEEPSDGPRSPASPDSESFDWKAIQE
GANSIVSSLNAAAAAPLSRQPSSDSDSVLSLKSVGSPFRLPPPSNQSAEEGEKEEGGKEE
GGKRGGRILKPGERSTLEAKKKKEQEEEEEEEEEEAKALRGGKKVYKSLITGKPRVEARG
RSQPQVEARGRSQPQLEARGRSQAQLEARGRSQPRAAPAAKPPGSDPERGSSRDSTPSRS
SSANQKGGKLLPPRTASPGSASSSSSSASRTTNKSGSAVRSGGGIPRSESASRVGGSTAA
KKAKAESEKPPALVRQSTFIKEAPSPTLKRKMEDGETASSPERIHESPVRPQEVTSSSRF
SRTGTWKRESSSSGGGGGGGSSGGGKHSTSLPRVGTWKRTGSSSSVLSASSESSEKGRSQ
EGQEGRGQEDRKGTWRRAKSGGEGRGFSDRAEDVWVRLEDCPVNNPRSPNGPPIISPAPS
SSVISPASSSSKIPSSTSSSCSNLNLRRSCESLDDKQQPPPQPSLQQTPPQQQQTP
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
tccagcctcatcgccaccaacgaggcgcacaggcagatcctgcgagatcacggctgcctg
cccacactgctgcagcacctgaagtctcacagcctcaccatcgtctccaacgcctgcgga
acgctctggaacctttcggctcgagacgccaaggaccaggaggcattgtgggagctgggc
gctgtgggcatgttgcgcaacctcatccactcgcgccacaagatgatcgccatgggcagc
gccgccgctctgcgcaacctgatggccaaccggccggcaaggtacaaagacgccagcgtg
gtgtcgccgggcgccggcgccccctcgctgcacgccaggaagcagaaagctctgttcgag
gagctggacgcccagcagctgtcagagaccttcgacaacatcgacaacctgagcccgaag
gcagcgcacaggaaggggcggggctgcagcggcgccacgggggggggcggcccgacgcgc
tcttacaccaacacgcccgttctgtccagcccgaagagcgccgacgggttgaagcggacg
agcgaggagccgttcgcccggcccgtgttcccgcccagcgtccgggcgtccagcgacagc
ctcaacagcgtcacgagcgcagacgggtacggaaaccgcggcaaaaccaaaccgtccacc
gagccgttctactcctcggacgagaacggaggcaacaagtgctgcgtctacaggaagtac
ccggccgacctggcgcacaaaatccgcagcgccaaccatatggcggacgacgacggcggc
gagctggacacgcccatcaactacagcctcaagtactccgacgagcagctgaactctggg
cgtcagagcccgagccaccgcggcgccgcagagagcgaggagacgagccgctggacgccc
ggctgcggcgccgcggtgacgcggctcccaaagggaaccgcatggcgtccgccccgccgc
agcggtatgtcgccacggcaacatcaaactacaggcgagccggcaccggagcagccgatc
gactacagcctgaagtacggcgccgacgtgacccgcaaacctctgttcaaacctgaggag
agcacccccccctcagcaccccctcccccgctgtcctcagctaacaagctccgccccccg
ccgccgaccaagcgcccgccgcccaaaggcagccaggaggcgccgcagacgtactgcgtg
gaggacacgcccatctgtttctctaggggctcctcgctgtcctcgctgtcatcggaggaa
gaggaggaggatgggaggaagaggagggggggaggcagcgactaccccacgcttcctgtg
agcgagaaggaggagcagcagcgtcagcagaaggaggcgcagagtcagacctccagtgcc
gccgctgctgcagccgccgcctctagggggcgacgcagccaccatcatcatcatcacgtg
acatcatccggcgcccggacgccgaagagcccccccgagccgccgtacgctcaggagacg
ccgctgatgttcagccgctgcacctccgtcagctccctggacagcttctccacctcctcc
atcgcctcctcggtgcgcagcagcgagccgtgcagcggcatgccgagcggcgtggtgagt
cccagcgatctgcccgacagcccggggcagacgatgcctccgagccgcgccaagacgcca
ccgccgcccagcagcaaacaggagaagaagaagcaggaggaggagagcagcgccgacgtc
atgctgcacttcgccaccgaaagcacgccgcacggattcagccgagcgtccagtctgagc
gcgctcagtgtggacgagccttacatcatggcggagatgaggaaggaggaagaggaggag
gcgaacaaggagaggaaggagaggaaggagagggaggagagggaggagagggaggatgag
gaagggcaactggacgagtcggacgacgacgacgacatcgagatcctggaggcctgcatc
aagagggcaatgcccaagtcgtcacggaaaccaaagaaacaacaacagcagccggcgcca
cggaaacccagccagcttcctgtctacaagctcctccccccgcagggccgcagccaatca
cagcagaggaaggacggtccatcggaagaggtgccgaggatttactgcgtggagggaacg
ccgctcaacttctccaccgccacctcgctgagcgacctcaccatcgactcaccacccaat
gaggaggctgcacctgcggctcagccctccaatcagagcaggggggcggggcttaggggg
gcgtggcctcctgagggcgacaacggtgacgacatcttggcggagtgcatcagtgccgcc
atgcctaaagcaagacccaggaagccggtccgcgcggcgcctggcgagatacaggctccg
ccccctctacaggctcccccccctcccccccggccccgcctctactcggcacgcagcagc
agaagaagaaaccgacgtccggtgaagccgatgcccccgcgggcgccatacagcatctcc
gcggcaacagcagccaaagcaaagccgggcttcaccttcgactcgccgcaccactacacg
cccatcgaaggcacgccgtgctgcttctcgcgcaacgactcgctcagctcgctcgacttc
gacgaagacgaaggcggcgagaaggacgaagagaagcgagtgaaggaggaagacggcagg
aagaggaagcagcagacggcggccgtcgttccccgaacaaagcccgccgccaacctgccg
gacgacaggcagaagttctgcatcgaggacacgcccgtctgcttctccaggaactcgtct
ctgagctcgctgagcgacatcgaccaggagaacaacaacaaggagttcgctgcccccccc
cctccggagcagggaggaacagccggcaggaagtcgccccccctgcaggaagagcagaag
ccccgccccccagcgagtggctacgcccccagagcgttccacgtggaggacacgcccgtt
tgcttctccaggaactcgtccctctcgtctctgagcatcgactccgaggacgacctcctg
caggagtgcatcagcagcgccatgcccaagaagaagaagaagggcgccgcgccaccgtcc
ctccctaaagaagaagacgaagacgacaacgggatattagccgaagaggagccttcggac
gggccgcggagccccgcctcccccgactcggagtcttttgattggaaggcgatccaggaa
ggagcgaactccatcgtcagcagcctgaacgccgccgccgccgcgccgctgtcccgccag
ccgtcctccgactcggactcggtgctgtcgctcaagtctgttggatccccgttccgcctg
ccgccgccgtccaatcagagcgcagaggagggggagaaggaggagggggggaaggaggag
ggggggaagcgaggggggcggatcctgaagcctggcgagcgcagcactctggaagccaag
aagaagaaggagcaggaggaggaggaggaggaggaggaagaggaggcgaaggcgctgcgc
ggagggaagaaggtttacaagagtctgatcaccgggaagcctcgggtggaggccaggggg
cggagccaacctcaggtggaggccagggggcggagccaacctcagctggaggccaggggg
cggagccaagctcagctggaggccagggggcggagccaaccccgagcggcgcccgctgcc
aaacccccagggagcgaccccgagcgaggctcctctcgagactccaccccctcacgctcc
tcctcagccaatcagaagggagggaaactgctgccgccgcgcaccgcctctccaggaagt
gcttcgtcttcatcatcttcagcgtccagaacgaccaataagagcggatcggcggtgagg
agcggcggtggcatcccgaggagcgagtcggcgtctcgagtcggaggatcgacggcggcg
aagaaagcgaaggcggagtctgagaagccgccggcgctcgtcagacagtcgactttcatc
aaagaggctccgagccccacgctgaagaggaagatggaggacggagagaccgcctccagc
ccagagaggattcacgagagccctgtacgcccacaggaagtgacatcatcatcacgcttc
agccgcaccggcacctggaagcgggagagtagcagcagcggggggggaggaggaggcggg
tctagcggcggcgggaaacactcgacctcgttgccccgcgtcggaacctggaagagaacg
ggaagctcctcctccgtcctgtcagcatcatcagagtccagcgagaaggggaggagtcag
gaggggcaggaggggcggggccaagaggacaggaagggcacttggaggagggcgaagagt
gggggagaggggcggggcttcagtgaccgagcggaagacgtttgggttcgattggaagat
tgtcccgtcaacaacccccgctcccctaacggccccccaatcataagccccgccccttcc
tcctccgtcataagccccgcctcctcctcctcaaagatcccgtcctccacctcgtcctcg
tgctccaacctcaacctgcggcgcagctgcgagagtctggacgacaaacagcaaccgccc
ccgcaaccgtcgctgcaacagaccccccctcaacaacaacagacgccc
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integrated database retrieval system
