Notothenia coriiceps (black rockcod): 104955184
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Entry
104955184 CDS
T04920
Name
(RefSeq) PR domain zinc finger protein 2-like
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00310
Lysine degradation
ncc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104955184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104955184
03036 Chromosome and associated proteins [BR:
ncc03036
]
104955184
Enzymes [BR:
ncc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
104955184
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104955184
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104955184
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2HE
zf-C2H2_8
zf-C2H2_11
zf-C2H2_6
YjdM_Zn_Ribbon
zf-C2H2_3rep
Motif
Other DBs
NCBI-GeneID:
104955184
NCBI-ProteinID:
XP_010780732
UniProt:
A0A6I9P123
LinkDB
All DBs
Position
Unknown
AA seq
1355 aa
AA seq
DB search
MEDSPHLYISEFVENEDMDKMDINQEETNIASDMVKSPYQDTERDSNYFQCQHCERHFTT
KPGLERHMHIHTSANNDAHKYKTNISLASNLELLHHEKVKPLDLAGSVMQLHTSSTTGSN
TPILSSGDHNAQPDKPGVSEGRHACKYCEKVFTTHTNKRRHERRIHEQHLQVTHVEKAHV
PQEENVEGMCSETNQQETELVDKMAPAAVLENEVGQAEQYMLDISSNISENLSFYIDGRI
VSTSTISSCEAAEVHSGSATVVGLDALILDPTQISQVLNTDSEMSGQPLARRRTATPPLL
PQIKTELESDVVVSSSSSSLVCSIIENLFPQNTEGTVVQKERTVFLSPKLKQLLEKQDGL
KLALIADGQKPLSPVSLSVLPAGTGRFKRRTGSPPPSSPQQSPREETADSGDCEAVNTGQ
TETQHSSPAHQTANVKDDATPPEEEPQTESWPPSTGGNSCNQQPLDLSNTVKSSEDIASA
DSALDLSFQKTNHGESELMLNFISHAVLTEGKSIEGMMGMTLIDSLEQNISFMNPDTSLL
TDFTILTSQDMMSPMQSMAEGLVYGLALPSNSLTPSPSLTPLSLQPSSPCTIAFTTHASH
TGLSTAPSLITVLAPSHISNRPIQVLAPDISQVTCTENALHFSECDLTTGFATTNSADPV
TLSQPFHPTLNLPSHMFLSDQITLNPPILESTPTSEGQFTPTVTFNDSLINSYNLTSNTV
LIECTIALEAPGSIVPAAVTLQENTAEPPAPTQMVVNHVEQEQIVSVPNPQTEDPTILMS
SIAESVTLSTTAASVLSDCPAPVVESGPDPELVVNAEPSTIKEEEAADSTVSALETPSKT
SPSSEKAEEEQTFTKNFICNVCDKLFHSMKELGHHVGDHADEWPYKCEFCVLLFSKPSAL
LDHRSSLHGVGKTYVCSACTKEFVYLCNLKQHQEELHPGQQCTYTEEEKGKLRPQNFNNL
TKVTTETSVPDAAEDPKVKKEEGEVDEAAEELLTTIKILASDGAKLKGPDVRLGINQHYP
SYKPPPFPYHNRSTTGTLASATNFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILTCA
NASDKRRYTPKRNPIPLRHFAKTQNGVLSTTNSTNGLNASNRLNASNRPSQSNRSKPNQD
SAVNVKFKVLSKRKKKLVQRVMPQRNKSVPSSNKMSPAHVDEQQEIFVCPHCSREFTMRR
SRTKHMAVCPKKPKEVKKRKEGGISVTKENDGHLHRGAEETQQSSPLHKTRLQTSSPAKR
PAILPVQTVLSNKRSKIIIKESTHLKQDTPTLSEVPIVRTFNPSMRQYSRMQHSVKRMPI
KITIVKPQQAAAQREERPPTPGPEDSSSSEHSPAV
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggaggactctcctcacctatacatctcagaatttgtagagaatgaggacatggataag
atggacattaatcaagaggaaaccaatattgcatccgacatggttaagtcaccataccag
gacactgagagggactcaaactattttcaatgccagcactgtgagagacacttcaccacc
aaaccaggcctggaacgacacatgcacatccacacctctgcaaacaacgatgctcacaaa
tacaaaaccaatatttcactagcttcgaatctggagttgttgcaccatgagaaggtaaag
cctctggatttagcaggctcggtcatgcagcttcatacttcatccaccactggctctaat
actcccattttgtcctctggtgaccacaacgctcagccagacaaaccgggagtgtcagag
gggcgtcatgcttgcaagtactgtgaaaaggtattcactacacataccaacaagcggcgg
catgagcgaaggatccacgagcagcacctgcaagtcacacatgtggaaaaagcccatgtg
ccccaagaggaaaacgttgaggggatgtgcagtgaaacaaaccaacaggaaacggagctt
gttgacaaaatggcacctgcagctgttcttgagaacgaagtgggacaagcagaacaatac
atgcttgacatctctagcaatatttcagagaatcttagcttttatattgatggaaggata
gtgtcaacaagtacgatcagtagctgtgaagcagctgaggttcattctgggtctgcaact
gtagttggactagacgccctgattctagaccccacccaaatcagccaggtgttaaataca
gattcagagatgtctggtcaaccactggcaaggagaagaaccgcgacacctccgctttta
ccacaaattaaaactgaactggagtctgacgtggttgtgtcttcttcctcatcttcactt
gtatgttctataatagagaatctttttcctcagaatacagagggtacagtggtgcagaag
gaaagaactgtgtttctgtctccaaagctgaagcagctgctggagaagcaggatggcctt
aaactcgcactcatcgcagacggccagaagcctttatcacccgtctctctgtctgtgctg
cctgcagggacaggacggttcaaaagaaggactgggtctcctccaccgagctctccacag
caaagccctagagaagaaacggcagatagtggagattgtgaagctgtgaatacaggacag
acggagacccaacatagttcacctgcgcaccaaacagccaatgtgaaggatgacgcaacc
ccacctgaggaggagccacagacggagagctggcctccctccaccggcggtaattcctgt
aaccagcaaccactggatctctccaacacagtcaaaagcagtgaagacatagcttcagcc
gattcggcgctggatttgagtttccaaaaaacaaatcatggggaatctgaactgatgtta
aatttcatttcacatgcagttttaacagaaggaaaatcaattgaaggcatgatgggaatg
accttaattgatagtttagagcaaaatataagcttcatgaatccagacacctccttactg
acagacttcaccatacttacaagtcaagatatgatgagcccaatgcagtctatggcagaa
gggcttgtttatggtcttgcacttccctccaattccctgactccatcaccctccctgacc
cctctctccttgcagccatcttcaccgtgcaccatagcattcaccacccatgcttcacac
acagggctctccactgctccttcattaatcacagtgttggcaccgtcacatatttcaaac
cgaccaatccaggtattagcccctgatatatcacaggtaacctgcacggaaaatgcatta
catttttcagagtgtgatttaactactggatttgccactacaaattctgccgaccctgtc
actctctcccaaccttttcacccgactctaaatctacccagccacatgtttctctctgat
caaataacactcaatccgcctatattggagtccactcctacgtcagaagggcaattcaca
cccactgtaactttcaatgattccctcattaactcgtataacctaaccagcaacacggtg
ttgatagagtgcacaatagctcttgaagccccggggagtatagtccctgctgcagtcacc
ttacaagaaaacactgctgagcctccagcacctacacagatggttgttaatcacgtcgaa
caggaacagattgtatcagtgcccaacccgcaaactgaagaccccactattctgatgtca
tccatcgcagaatcagttactctatccaccaccgccgcctcagtgctatctgattgtcct
gctccagtggttgaatcaggtcctgacccagagcttgttgttaacgcggagccatcaacc
atcaaagaggaagaagctgctgacagcactgtttccgccctcgaaaccccatctaaaacc
tcgccttcttctgagaaagccgaagaggagcagactttcaccaagaatttcatctgcaac
gtgtgcgataagcttttccattcaatgaaagaactgggccatcatgtaggtgaccatgct
gatgaatggccctacaaatgtgagttctgcgtgctgctgttcagcaaaccctccgctttg
ctcgatcatcgatcaagcctccacggggtgggcaagacttatgtttgcagtgcatgcacg
aaggaatttgtctacctttgcaatctaaaacagcatcaggaagaattacatcccggacag
cagtgtacatacacagaagaggaaaagggaaaactaagacctcagaacttcaataactta
acaaaagtcaccacggagacctcagtgcccgacgctgcagaggatccgaaggtgaaaaag
gaagaaggggaagtagatgaggctgctgaagaactgttaacaactataaaaatcctggcc
tcagatggagccaaactcaaagggccggatgttcgtctcggcatcaaccaacattacccc
agctataagccccctccgtttccctaccataacaggtccaccacgggcaccttagcttca
gccacaaacttcaccacccacaacatcccacaaaccttcagcacggccattcgctgcacc
aagtgtgggaagagctttgataacatgccagagttacataagcacatcctgacttgtgcg
aatgccagcgataaaaggcgatacacccccaaaaggaatcccatcccactacgccacttt
gcaaaaactcaaaatggagttctatctaccactaactccactaacggactaaatgcgtcg
aacagactaaatgcgtcgaacagacccagccagtccaacaggtccaaacctaaccaagat
tcagcagtaaatgtaaagttcaaggtgctgagcaagaggaagaaaaagttggtccaaagg
gtcatgccacagaggaacaagtcagtcccttcatcgaataaaatgtcacccgcacatgtg
gatgagcagcaggagatcttcgtctgcccgcactgcagcagggagttcacaatgcgccgc
agcagaaccaaacacatggccgtctgccccaagaaacccaaagaggtgaagaaaaggaaa
gaaggaggcatctctgtgacgaaggagaatgatggacacctgcacagaggagctgaagag
acacaacaatcctcacctctgcataaaaccagactgcagacttctagccctgctaaaaga
cccgccatcctaccagtgcaaaccgtcctgtcaaacaaaagaagtaaaataattatcaaa
gagagcacacacctgaaacaagacacgcccactctgagtgaagttcccatcgttcgcact
tttaacccctctatgcgacagtatagccgaatgcagcacagcgtcaaacggatgcccatt
aagatcaccatagtgaaaccacagcaggctgcagcgcagagggaggagcggccccccacg
ccgggcccagaggacagcagcagctctgagcacagtcctgcagtctga
DBGET
integrated database retrieval system
