Notothenia coriiceps (black rockcod): 104958355
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Entry
104958355 CDS
T04920
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00780
Biotin metabolism
ncc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
104958355 (hlcs)
Enzymes [BR:
ncc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
104958355 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
104958355 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
104958355 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
104958355 (hlcs)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
Orbi_VP2
Motif
Other DBs
NCBI-GeneID:
104958355
NCBI-ProteinID:
XP_010784373
UniProt:
A0A6I9PC48
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MLITLCYVYLWVRFNKCYSVLIRNSLCRLNSSSFSFGFRLCSSPASAASPTGAHTAAPRP
PSPPPPEDNVFLQLGDRAVYVTEPQACDDLSKWTVLLGSSLVCGPRIENISFIIEATGHR
VGYHSPHTSNQKVLKWSDYCRPLAYSPGQPFRAVAQASVDNFSRLGVAFIEDRLQLDNGL
KPSKIIPVLLQESTLSELLEKQCPKTETFTRTGGGAAERRPPSDHQLLQCPKGSLLLTPE
VKRRLEERRGSEPLRGSKDLGVVCDQEDRSLGNYLHMEGHKHHLHLSSCHECLELENSTI
LSVKYASAENIPDLPDDDSGELGSGDETLDDVEPDGGFSGLSDCKSKPPNLLLYTGGCQK
RYEAVRQLISECIDMENNIIYPLQPQQALSDPWLENTRLLVLAEEETLTPQLQTRFLTYL
SQGGRVLGLASTLCPAGLSLEARERRQGQVSRLIFTREDSTELQLSVLASEKVYIRDTQG
GGEVELWGELKGDSPHQRDMVVVRVTHGGDGGEAVLCQAHLEIAPDSQNLPPEGFDELKV
SNALRYEVLTEILNSLGLSCELSQTPPPSPVHLLATSQEAKASFVNWLQTRADQKGLLKS
SNTSLKMVSCSELQDGPSLPDGSLALVTNSSEAQSWPQFSMETYSKNLKSSVLGHTLLYA
EVATSTMDLLQGLTLHLPKDVGLIAIAGRQIQGRGRGGNAWLSPPGCAMFTLSLQVELSS
RLGQRIPFLQHLVALAVVEAVRSLPGYQDLDLRVKWPNDIYYGNLMKLGGVLVTSTVIGS
TFHLLIGCGFNVTNSNPTVCINDLIQQHNTQQGCSLPPLCCAQIIARSVSFLEALICSFQ
QGGPDAVLPTYYKRWLHSPFHSHLRTHHLSSAPSSPDEVKTSKEASKLLELDAAVLHRDI
RPPPLLPPLRNSTPMWKSSRPQDVLKSATWLLKGDGPWLQSVNSQSYGSPS
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgttaataacgctgtgctacgtctatctgtgggtgcgctttaacaagtgctattcggtg
ctcatccgcaacagcctgtgcagactgaacagcagcagcttcagcttcggcttcagactg
tgctccagcccggcctcagcagcttctccgaccggagcacacacagccgcaccacggccg
cccagcccgcctcctcctgaggacaacgtcttcctccagctgggggacagggccgtctat
gtcacggagcctcaggcatgtgatgaccttagcaaatggaccgtgctgttgggctcctct
ctggtttgtggtccacgcatagagaatatttcattcatcatagaggcgacaggacacaga
gtgggctaccattctcctcacacatccaatcagaaagtgctgaagtggtctgactactgc
cgccctctggcctacagccctgggcagcccttcagagcggtggcccaggccagcgtggat
aacttcagtcgtctgggagtggctttcattgaagaccgccttcagctggacaatgggctt
aagccttcgaagataatccctgtcctcctccaagaatccactctcagtgaactgttggag
aagcagtgtccaaagactgagactttcacccgcactggagggggtgctgctgagcgtcgt
cccccgtcagaccaccagctcctccagtgccctaaaggcagcctgctcctcaccccggag
gtgaagaggaggctggaggagcgccgagggtcggagccgctcagagggagcaaggacctg
ggagtcgtctgtgaccaggaggaccgctccctggggaattatctccacatggagggccac
aaacaccacctccatctgtccagctgccacgagtgtttggagctggagaacagcaccatc
ctctctgtcaaatacgcctcagctgagaacattccagaccttcctgatgatgactcaggc
gagctcgggagtggagatgagactttggatgatgtggagcccgatggaggattttctggg
ctgagtgactgtaaaagcaaacctccaaatctcctgctgtacacggggggttgccaaaag
cgttatgaagccgtgcgccagctgatatcagagtgtatagacatggaaaacaacataata
tatcccctccaaccgcagcaggctctgagcgacccctggctggagaacaccaggctcctg
gttctggccgaggaggaaactctcaccccccagcttcagacccgttttctcacctacctg
agccaggggggcagggtgttgggtctggcctccaccctgtgccctgcaggcctgtctctg
gaggcccgggagaggcggcaggggcaggtgagccggctgatcttcacccgggaggacagc
acggagctgcagctcagcgtgctggccagcgagaaggtctacatcagggacactcaggga
gggggtgaggtggagctgtggggggagctgaaaggagacagcccccatcagagggatatg
gttgttgtcagggtaacccacggaggagatggtggagaagctgtcctctgtcaggcacat
ctggaaattgctcctgactcccagaatttaccacctgaaggttttgatgagctgaaggtc
agcaatgctctgcgttatgaagtcctgacagagatcctcaactctctgggcctcagctgt
gagctcagccagaccccccccccaagcccagtccacctgctggccacctctcaggaggcc
aaggccagctttgtgaattggctgcagacacgtgcagaccagaagggtctccttaaatca
tccaacacctccctaaagatggtgtcctgctctgagctccaggatggtccttcgctgcct
gatggctctctggccctggtcaccaactcttcagaggcccagagctggcctcagttcagt
atggagacctacagtaagaacctgaagagcagcgtgctgggacacaccctgctgtacgcc
gaggtcgccacgtccaccatggacctgctacaaggtctgactctgcacttaccaaaggac
gtgggtttgatagcgatagctggtcgacagatccagggcagaggtcggggggggaacgcc
tggctcagccccccggggtgcgccatgttcaccctgtccctgcaggtggagctgagctcc
aggctggggcagaggatccccttcctgcagcatctggtggctctggcggtggtggaggct
gtccgctcacttcctggataccaggatttagacctgagggtgaagtggcccaatgacatc
tactacggtaacctgatgaagctcgggggggttctggtgacttccacagtaataggatca
acgtttcatctgctcataggctgtgggttcaacgtgaccaacagtaaccccacagtgtgc
atcaatgacctgatccagcagcacaacacccagcagggctgcagcctgcccccgctctgc
tgcgctcagatcatcgcccgcagcgtcagcttcctggaggccctcatctgcagcttccaa
caggggggccccgacgctgtcctgcccacctactacaagagatggctgcatagtccgttt
cacagccatttaaggacacatcatttgtcctcggcaccatcctccccagatgaagtgaaa
acgtcaaaggaagcatccaaactgctggagctggatgcagcggtgcttcacagagacatc
cgtcctcctcctcttcttccccctctcagaaacagcacgccaatgtggaagtcatcacgg
ccacaggatgttctgaagagtgcaacatggcttctgaaaggtgacggaccctggctgcag
tctgtgaacagtcagagttatggctccccgtcctga
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