Notothenia coriiceps (black rockcod): 104959284
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Entry
104959284 CDS
T04920
Name
(RefSeq) neurogenic locus notch homolog protein 1-like
KO
K02599
Notch 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104959284
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
Ank_2
Ank
Notch
NOD
NODP
EGF_CA
Ank_4
Ank_5
Ank_3
EGF_2
cEGF
EGF_3
DL-JAG_EGF-like
Motif
Other DBs
NCBI-GeneID:
104959284
NCBI-ProteinID:
XP_010785455
UniProt:
A0A6I9PCF5
LinkDB
All DBs
Position
Unknown
AA seq
1779 aa
AA seq
DB search
MCNINIDECAINPCHNGGTCVDGTDSFTCLCPEGYNDPTCLSQVDECGSNPCIHGHCQDL
VNGYKCTCDSGWSGPNCDINNNECESNPCMNGGTCKDMTSGYHCTCRAGFTGPNCQTNIN
ECASNPCLNQGSCIDDVAGYKCNCLLPYTGDNCETLLAPCSPRPCKNGGVCKESEDYQSF
SCICPEGWQGQTCEIDINECVKSPCRNGAMCHNTMGGYQCKCQPGYTGQKCETDTDDCKP
NPCSNGGLCRDSINSFTCTCLPGFRGGRCEQDINECESNPCRNGANCTDCVNSYTCTCRP
GFSGINCEINTNDCTDSSCFNGGTCVDGINAFTCLCLPGFTSSYCQYDINECDSKPCLNG
GSCLDSYGTYKCTCPHGYTGINCQNLVRWCDSSPCKNGGTCWQQGASYTCQCQTGWTGLY
CDIPSVSCEVAAKQQGVEVAHLCRNSGQCLDAGNTHYCRCQAGYTGSYCQEQVDECSPKP
CQNGAACTDYLGGYSCECLPGYHGVNCSKEINECQSQPCQNGGTCIDLINTYKCSCPRGT
QGVHCEMNLDDCTPSSDPLTNEPKCFNNGKCVDRIGGYQCVCPAGYVGERCEGDVNECLS
DPCDPQGSYNCVQLTNSYRCECRTGYTGQRCDKVFDGCKGKPCKNGGSCAVASNTPHGFI
CKCPPGFTGSSCEYDSRSCGGLNCRNGGTCVSGHLGPRCLCPPTFTGPECQTPTDSLCIS
NPCYNGGTCQTTPDAPFFKCSCPINFNGLLCHILDYSFVGGFGRDIIPPPEVEVSCEIPQ
CDEWAGNHICNSLCNNHACGWDGGDCSLNFDDPWQNCSAALQCWRYFNDGKCDAQCNSPG
CLYDGFDCQGQEGTCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLDCAENMPEKLADGH
LVLVVHIPPEQLKNRSSTFLREISSVLHTNVVFRRDAKGEPMIFPYYGNEQDLVKHNVLK
RSADGWPEWAARPASVQGQVQESVSAMVSRRRRRELDPVQIKGSIVYLEIDNRQCYQQSS
ECFQSATDVAAFLGALATSGNLNVPYIEAVTSVRPAPSGSELYPMYVVFLGLAALGFVCL
GVLVSRKRRREHGQLWFPEGFKASEPTKKKRREPLGEDSVGLRPMKNSDINLMDDNQNEW
DDEDPECRRFRLEEQAMLELSDRTDHRKWTQQHLDAADLRTASIAPTPPQGEIENDCMDV
NVRGPDGFTPLMIASCSGGGLETGNSEEEEDPSAEIISDFIYQGANLHNQTDRTGETALH
LAARYARSDAAKRLLESSADANVQDNMGRTPLHAAVAADAQGVFQILIRNRATDLDARMH
DGTTPLILAARLAVEGMVEELINCHADANATDDSGKSALHWAAAVNNVEAAMVLLKNGAN
KDMQDNKEETPTFLAAREGSFETAKVLLEHFANREITDHLDQLPRDIAQERMHHDIVRLL
DEYNVVRSPGLHSGPLSTSSLSPPLCSPNDYLSNLKPNLSVKKVRKLSAGKGGKDGGKDN
RMKKKKSLDGKGNLLDSTGVLSPVDSLESPHGYLSDVASPPMTSPFQQSPPMSLNHLQGN
GDHMGQMMGKDMSCMSFDPPRLSHMPVSSPNSQGRGGGQCDWISRMHPGVGQQGGYSQPI
SHNMMGALHGVSTATLSQIMGYQNMQTSHLVMQQQQHSRQLQHQNSSSTTGGLNQSFPSV
DLNDGRSMPILTVMPQETQILGTQFLTPPSQHSYSGPMDHTPNHQLQVPDHPFLTPSPGS
PDQWSSSSPHSNMSDWSEGISSPPTSIHSQMNLIPEQFK
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaacatcaacatcgatgagtgtgccattaacccgtgtcacaacgggggcacgtgt
gtagacggcaccgacagcttcacctgcctgtgtccggagggctacaacgatcccacctgc
ttgtcccaggtggacgagtgtggcagcaacccctgcatccatggacactgccaggacctc
gtcaacggctacaaatgtacctgtgactctggctggagcgggcccaactgtgacatcaac
aacaacgagtgtgagtccaacccgtgtatgaacggggggacctgcaaggacatgaccagt
gggtaccactgcacctgcagggcaggcttcactggacctaactgccagactaacatcaac
gagtgtgcctccaacccctgcctgaaccagggctcctgcatcgacgacgtggccggatat
aagtgcaactgtctgctgccctacaccggtgataactgtgagaccctgctggcgccctgc
agcccaagaccctgtaaaaacgggggtgtttgtaaagagtctgaagattaccaaagcttc
tcctgcatctgccccgaaggatggcaaggtcaaacatgtgagatagatatcaacgaatgt
gtgaagagcccgtgccgcaacggtgctatgtgccataacaccatggggggctaccagtgc
aagtgccagccaggttacaccggccagaagtgtgagaccgacactgacgactgcaaacca
aacccctgcagtaacggaggtctgtgccgtgacagtatcaactctttcacctgcacatgt
ctgcccgggtttcgtggcggccgatgtgagcaggacataaacgagtgtgagagtaacccc
tgtaggaacggggcaaactgcactgattgtgtgaacagctacacctgcacctgccggccg
ggcttcagcggtatcaactgtgagatcaacaccaacgactgcaccgacagctcctgcttt
aacgggggcacctgtgtggacggcatcaatgcgttcacctgcctgtgtctgcctgggttc
accagcagctactgccagtatgacatcaacgagtgtgactccaagccgtgcctcaatggg
gggtcctgcctggacagttacggcacatacaagtgcacctgtcctcatggctacacagga
atcaactgtcagaatctggtgcgctggtgtgattcgtccccctgtaaaaacggaggaaca
tgctggcagcagggggcctcgtacacctgccagtgtcagactgggtggaccggtctctac
tgtgacattcccagtgtgtcctgtgaggtcgcagccaaacagcaaggggtggaggttgct
cacctatgcaggaactcaggccagtgtctggatgctggaaacactcactactgtcgctgc
caggccgggtacaccgggagctactgccaggagcaggtggacgagtgctcccccaaaccc
tgccagaacggagcggcatgcaccgattacctgggaggctacagctgtgagtgtctacct
ggatatcatggtgtaaactgctccaaagagatcaatgagtgtcagtcgcagccctgtcag
aatggaggcacgtgcatcgacctgatcaacacgtacaagtgctcctgcccccgaggaaca
caaggcgtgcactgtgagatgaatctggatgactgcaccccctccagcgaccccctgacc
aacgagccaaagtgcttcaacaacgggaagtgtgtggaccgcatcggaggctatcagtgt
gtgtgtccagcgggatatgtaggagagcgctgcgaaggcgacgtcaacgagtgtctgtcg
gacccctgcgacccccaaggctcctacaactgcgtccagctcaccaacagctaccgttgc
gagtgccgcacgggatacacaggtcagcgctgtgacaaagtgtttgacggctgtaaagga
aaaccctgcaaaaatggagggtcttgtgctgttgccagtaacacacctcacggcttcatc
tgcaaatgtcctcctggcttcaccggctcttcctgtgagtacgactctcgctcctgcggg
ggtctgaattgcagaaatggcggtacctgtgtgtcgggccacctgggcccccgctgcctc
tgcccccccaccttcactgggcccgagtgccagacccccaccgacagtctctgcatctcc
aacccctgctacaacggcggcacgtgccagaccacccctgacgctcccttcttcaagtgc
agctgcccgatcaacttcaacggcctgctgtgccacatcctggactactccttcgtgggg
ggcttcggccgggacatcatccccccgccggaggtggaggtgagctgcgagattcctcag
tgtgacgagtgggccgggaaccacatctgtaactctctgtgcaacaaccacgcctgcggc
tgggacgggggggactgctcgctgaacttcgacgacccgtggcagaactgttcggccgcg
ctgcagtgctggcgctacttcaacgatgggaagtgtgacgctcagtgcaacagcccgggg
tgtctgtatgacggcttcgactgccaggggcaggaggggacctgcaacccgctgtatgac
cagtactgtaaggaccactatgctgacggtcactgtgaccagggctgcaacaacgctgag
tgtgagtgggacgggcttgactgtgcagagaacatgccggagaagctggcagatgggcac
ctggtcctggtggtccacatcccccccgagcagctgaagaaccgctcctcaacgttcctc
agagagatcagcagcgtgctccacaccaacgtggtgttccgccgtgacgccaaaggagaa
cccatgatcttcccgtactacggaaacgagcaggacctggtgaaacacaacgtgctgaag
cgctccgcagacggctggccggagtgggccgccaggcccgcctccgtccagggtcaggtc
caggagagcgtgtccgcaatggtcagccgccgcagacgcagagagctggaccctgtgcag
atcaaagggtcgattgtgtacctggagattgataaccgtcagtgttatcagcagtccagt
gaatgcttccagagcgccacagatgtagcggcgttcctcggagcgctggccaccagcggg
aacctgaacgtcccctacatcgaggctgtcaccagtgtgagacctgccccctccggctca
gagctctaccccatgtacgtggtcttcctgggcctggccgctctgggtttcgtttgcctt
ggtgttctggtgtcccgtaagaggcgacgcgagcacggccagctctggttccctgaaggc
ttcaaagcttcagagcccaccaaaaagaagcgcagagagcctctgggagaggactctgtt
gggttgaggcctatgaaaaactctgacatcaatcttatggatgacaatcagaacgaatgg
gatgatgaggatccagaatgcaggcgcttcaggttggaggagcaggccatgttggagctg
agtgaccgtacagatcacaggaagtggacacagcagcatctcgatgcagctgacctgcgc
actgcctccatagcaccaactccccctcagggagagatcgaaaacgactgcatggatgtg
aacgtcagaggaccagatggtttcaccccccttatgatcgcctcctgcagcggtggaggg
ctggagacgggcaacagcgaagaggaagaggatccctcggctgaaatcatctccgacttt
atttaccaaggcgccaacctccacaaccagacggatcgcaccggggagacagccctccac
ctggccgctcgctacgcccgctccgatgctgccaaacgcctcctggagtccagcgccgac
gctaacgtccaggacaacatgggacgcaccccgctgcacgccgctgtggctgcagacgct
cagggagtcttccagattttaatccgaaaccgcgccactgatcttgacgcccgcatgcac
gacggaacaacaccgctgatcctcgccgcgcgattggctgtggaggggatggtggaggag
cttatcaactgccacgccgacgctaacgccaccgacgactctggaaagtctgctctgcac
tgggccgcggcggtgaacaacgtggaggccgccatggtgctgctgaagaacggagccaac
aaagacatgcaggacaacaaggaggagacacctaccttccttgccgcccgtgaaggaagc
ttcgagacagctaaagttctcctggaacatttcgccaaccgcgagatcacggaccacctg
gaccagctgccccgagacatcgcccaggagcgcatgcaccacgacatcgtgcgcctgctg
gacgagtacaacgtggtccggagcccagggctccacagcgggcccctgagcacctccagc
ctctccccccccctctgctcccccaatgactatctcagcaacctcaaacccaacctctct
gtaaagaaggtccgtaaactgagtgcagggaaaggaggaaaagacggaggtaaagataac
aggatgaagaagaagaagtcactggatggaaaggggaatctgctcgattcaacaggcgtc
ctctccccagtggattctctggagtctcctcacggatacctctcagacgtagcttctcct
cccatgacatcccccttccagcagtcgcctcccatgtctctaaatcacctccaaggcaat
ggggatcacatgggccagatgatgggtaaagatatgagctgcatgtctttcgacccccca
cgtctctcccacatgcccgtctccagccccaacagtcagggcagagggggaggtcagtgc
gactggatctcaaggatgcacccgggtgtgggccagcaggggggctacagccagcccatc
tcccacaacatgatgggggctctgcacggggtcagcacggccacgctgtctcagatcatg
ggctaccagaacatgcagaccagccacctggtgatgcagcagcagcagcactcgcggcag
ctccagcaccagaactccagctccaccacgggggggctcaaccagagcttccccagcgtg
gatctgaacgacgggcgctccatgcccatcctcaccgtcatgccgcaggagacccagatc
ctcggcactcagttcctcacccccccctcccaacacagctactctggccccatggaccac
acccccaaccaccagctgcaggtgcccgatcaccccttcctcaccccttcccccggctcg
cccgaccaatggtccagctcgtccccacattccaacatgtctgattggtcggaaggcatc
tcgagcccacccacgagtatccattcacagatgaacctgatcccggagcagttcaagtag
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integrated database retrieval system
