Notothenia coriiceps (black rockcod): 104962374
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Entry
104962374 CDS
T04920
Symbol
atm
Name
(RefSeq) serine-protein kinase ATM
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03440
Homologous recombination
ncc04068
FoxO signaling pathway
ncc04110
Cell cycle
ncc04115
p53 signaling pathway
ncc04210
Apoptosis
ncc04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104962374 (atm)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
104962374 (atm)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104962374 (atm)
04210 Apoptosis
104962374 (atm)
04115 p53 signaling pathway
104962374 (atm)
04218 Cellular senescence
104962374 (atm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ncc01001
]
104962374 (atm)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncc03032
]
104962374 (atm)
03036 Chromosome and associated proteins [BR:
ncc03036
]
104962374 (atm)
03400 DNA repair and recombination proteins [BR:
ncc03400
]
104962374 (atm)
Enzymes [BR:
ncc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104962374 (atm)
Protein kinases [BR:
ncc01001
]
Serine/threonine kinases: Other
PIKK family [OT]
104962374 (atm)
DNA replication proteins [BR:
ncc03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104962374 (atm)
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
104962374 (atm)
DNA repair and recombination proteins [BR:
ncc03400
]
Eukaryotic type
Check point factors
Other check point factors
104962374 (atm)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PI3_PI4_kinase
TAN
FAT
FATC
Motif
Other DBs
NCBI-GeneID:
104962374
NCBI-ProteinID:
XP_010789117
UniProt:
A0A6I9PLT2
LinkDB
All DBs
Position
Unknown
AA seq
2636 aa
AA seq
DB search
MSLALHDLLVCCRGLENDKATERKKEAERFRRLLRSPDVVQELDRASGSKAKGSKQLTWD
AVFRFLQRYVQKETESMQSSKSNVTATTLTIRKKKMAEVCSLIKYFIRYANKRGPYLKCS
EILKHVMDVLHDSYTCSAYGEDYSSLLVKDILSVRKYWCDIPPQQWHNLLDLYCDLFNSS
SKSINRVLVSRVIHTLVQGCCMQTEGFNHALFGFFSKALMNARQEKHLTVLEHLVSALNI
FLRCAAMNCRMRVCQLGEELLPSVLYVWADMRPSAALKEEIVEFFNLQICVHHPQGAKAQ
DTGAHAEDWSRWRSLLFNLYEALIREISHLGSRGKYVTGTRHIAVKDNLIELTADICHQL
FSEDNDAHVLEVTQASLRASHMSSPTKGAASKRRRIELGWEVLRDHLQPQNSDFDVIPWL
QITAVLTSKYPSMVPSQELVPLLSVLLQFLLEQRRGERGPYVLRCLTEVACCQARHPERT
QVHRAELSRLWGRVWLLALRGVSSPQTDALSLDLLSSIVHGGLINMDREFWKLFSGSACK
PSHAAALCLAQSLLKCSPPKSITPSSGWDCVGVSEGSLNLKETLIAWLLMSDQSDEMEES
SRPHPIICRDFPYNLIANILVSLTLKDTRTGLKFLLGAEGVESAFFQEQTSSNGKDNLEE
IERLYLQFSFNTLPSPLQEFDGSVKTSETDGQFAVVPGLRNKLEQSLLCVADNLLNCFSP
DSQATPPECLVRCFSLLTGVLAAYVSSGFLSEEEACRSPLFTKAKALARDFSGFVSGVKV
KMAEEGTMSTLRSVMKLCTQSACRNNKDKICPIWSTLFIMILPASLLSELAEICKLLLSS
VSKRVSVLDEDDHMEEDWDVTRTQQGDDIDLFEEGDESTSSNGTHRQQGEGSEGSCGPGA
KSLLAEDHLAQQDLALLAVLDFLCECGSMQPVHALLFKPQEVRRRLLLLAEQVDFNKALH
LNMYLLLLKKLPAEDSLSPEDFDTLLRPLADLCSLHRQDQEICAAVLLGLLPSIMSLGKT
QHIPEEMRHVQGSLLQVLSGFCFLSQTGKCVAAVRAALVRCLVALLEADPCCEWAVLSIR
EEDRPVSVLLPSHLADAHHQVRMLVAMSVERLFLEMRPGRLDKRKMLPLKHQLFLEMRPG
RLDKRKMLPLKHQQAAFENVYLKAQEGMRLPRSSSAEGQQDEVFNRKAALLKSLSVVMCC
SPVCEKQSLFALFQSYKENNIEEQLIKKMLCSVSRALGYRSVKMFVSSHLYYLVAEWLAQ
RESDDRYTLGSFPFTLLDHNALQEFYKSSYQVLIPHLVFLDDFEQVKSIGRYLEKDWKEL
LADCFPKIMVNILPYFALSGQDAQVAQKREKAHKVYDLLKDASCLGKQQIDSLIHSNLAD
IVVELLMTLYEGSEEEKGDLKCFIGELDPVPNPPYFSSYVIKATLDYLSKCHSANHKSLV
AVLSKTPVALSVSGGKTLLRAVLQCDEVSTRSLSLCCDLLTSVCRAALQFCDDALDCHLQ
VIVGTLTAQVTSRPAVTQQVLSLLQFLVIDNQQKLKGAISQLEPFPDLPEFRELRSVQHK
LKYNTGTFTLREEIAHFLSVTSCDSLPLTRLEGLKELTRQLHDNKDQIRELLKECQAEPS
DSMLVKLVLSLLQLCKLAVNHPGGADILEAAGSCLGELGPVDFSTIALLHGRDPLYEKAV
SLFISTESQCLYIILNCMNDALTQQRIEVRKAAGQCLKNILATQSGVDFWAQHKDNRDPM
LTYLNPFRKAKKTGAAVSEEESLGARQKLESQDFWIPRAGGHKAWLKALCTALLDSGGVR
SEALLLTRPLCLVRVDCCQRLLPLIIHSVLMDDVNGSWRQLLSSHIQDFFSFCSRSAQAS
SRTATPLNSDSESDAASQGLYDKTSLRTMLAVIDYLRHQQRSLEADSKSCSTVCDSNFWL
ELNYLEVAKAAQSCSAHFTALLYSEIYVDKIKANMEEGRRTKARASRRINLEENSQSFTI
SSLTEKSMEDTNISLQELLIEVYRSIGEPDSLYGCGGETLTSPLTRIRTYEHEAMWGKAL
NSYDLHSTLPEVTRQVGIVEGLQHFGLSSILATYMRGLESEGLEWGAELRELRFQAAWRN
TQWDCELTERSEKSKLGYHESVFCSLQALRDKEFSLFHETMEQARGAEVEELCRGSLEAV
SSLYPALRNLQSIRELESVKQLFSRPFSDVSLRAVCSRWRQSSLLLADSDFSLVEPILAV
RSVAQQTLIGRVGDPDSSQYLSSVLTEHLMELCRLARTAGNTQVVCVCVTLDKMKALNVL
LWVTFFFSADLCPLVQGQDDLRQDAVMQQVFSMCSMLLQRNTDTRKRKLNIRRYKVVPFS
QRSGVLEWCSGTVPIGQFLIDASKGAHKRFRPQDATNLACRRKMNEAQKLAFDEKLQAFS
EVCRSFRPVFRYFCMERFLDPAVWTEKRLAYTRSVATSSIVGYIVGLGDRHIQNILVDEQ
TAELVHIDLGVAFEQGKILPTPETVPFRLSRDIVDGMGITGVEGVFRRCCEKTMEVMRNS
QEALVTIVEVLLYDPLFDWTMNPLKAFYLQHDEQQELNATLGSTMGGEDMDNSRKSRDSQ
SYNKVAERVLLRLQEKLKGVEGGTVLSVRGQVNLLIQQAMDPENLSRLFSGWQAWV
NT seq
7911 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggctctacatgatctcctggtttgctgcagggggttggagaatgacaaagca
acagagaggaagaaagaagctgagcgcttcagacggctgctgagaagtccagatgttgtg
caggagctggatcgtgcctcaggatccaaagctaaaggctccaagcaactcacatgggat
gctgttttcagatttctacagcgttatgtccaaaaggagacagaaagcatgcaatcaagc
aaatccaacgtcacagcaactactctgactatccggaagaagaagatggcagaagtgtgc
agcttgatcaaatacttcattcgttatgcaaacaaacgcgggccttatctaaagtgcagt
gagatactgaagcatgtgatggacgtcctgcacgactcatacacctgttcagcctatgga
gaagattatagcagtctcttagtaaaggacatcctctctgtccgcaagtactggtgtgac
atccctcctcaacagtggcacaatcttctggacttgtattgtgatttgttcaactcttca
tccaagtccatcaaccgtgtcctggtgagcagagtgatccacaccctggtgcagggctgc
tgcatgcagactgaaggattcaaccacgctctgttcggcttcttctccaaagcattgatg
aatgccaggcaggagaaacacttgactgttttggagcacctggtctcggctctcaacatc
ttcttgaggtgtgcggccatgaactgtcggatgagggtgtgtcagctgggagaggagctc
ctgccgtctgtcctgtatgtttgggcggacatgaggcccagcgcggctctcaaagaggag
atcgtggagttcttcaacctgcagatctgtgttcaccacccccaaggagccaaggcacag
gatacaggagctcatgctgaggactggagccggtggcgcagtctgctcttcaacctgtac
gaggctttaatcagagagatcagccatttaggcagcagggggaagtacgtcacagggacc
agacacatagccgtcaaagacaacctcattgagctcacagcggacatctgtcatcagctg
ttcagtgaggataatgacgcccacgtcttggaggtgacccaggcctccctcagagcctcc
cacatgagcagtcccaccaaaggagccgccagcaagcggcgccgcatcgagctgggctgg
gaggtcctccgggaccacctgcagccgcagaacagtgactttgatgtcataccatggctg
cagatcacagccgtgctcacctctaagtacccgtccatggtgccgtcccaggagctggtc
ccgctgctgtccgtgttgcttcagttcctgttggagcagcggagaggagagaggggcccg
tacgtgctgcgctgcctgacggaggtggcctgctgccaggcccgccacccggagaggacc
caggtccaccgggcggagctgtcccggctgtgggggcgggtctggctcctggccctgaga
ggggtgagctctccccagacagatgccctcagcctggacctgctgagctccatcgtccac
ggggggctgatcaacatggacagagagttctggaagctcttctctggatcagcatgtaaa
ccgtcccacgctgctgctctctgtctagcacaatccctgctaaagtgctcgcccccaaaa
agtatcacccccagttcgggctgggactgtgtgggggtctcagaaggatcactgaacctg
aaggagaccctcatcgcctggctgctgatgagcgatcagagcgatgagatggaggagagc
tccagacctcaccccatcatatgcagagactttccgtacaatctaatagcgaacatcctg
gtctccctgaccctgaaggacaccagaactgggctgaagtttctgctgggtgctgaaggg
gtagagagtgccttttttcaagaacaaacctcctctaacggtaaagacaacctggaagag
atcgagaggctttacctgcagttcagcttcaacactctgccctcaccgctgcaagagttc
gacggatcagtgaagacgtctgaaactgacggacagtttgccgtcgtccccggcctcagg
aacaagctggagcaatccctgctttgtgtggcggacaacctgctcaactgcttctctccg
gattctcaggcgacccctccggagtgtctggtgcgctgcttcagtctgctgacaggggtt
ttagcagcgtacgtgtcctctgggtttctgagtgaggaggaggcctgccgctcaccgctc
ttcactaaagccaaggctctggcccgggacttcagcggttttgtttccggtgtgaaagtg
aagatggcagaggaaggaaccatgagcacactgaggtccgtcatgaagctctgcacacag
tcagcctgcagaaataacaaggataaaatctgccccatctggtccactctgttcattatg
attctgccggccagtctgctcagtgaactggctgagatctgcaaactgttgctaagcagt
gtctcaaagagagtgagtgttctggatgaagacgatcacatggaggaggactgggacgtg
accagaactcaacaaggggacgacatcgacctgtttgaggagggggatgagtccaccagc
agcaacgggacccacagacagcagggagagggcagtgagggctcctgtgggccgggtgca
aagagtctgttagcagaggatcatctggcccagcaggacctggctctgctggccgtcctg
gacttcctgtgtgagtgcggctccatgcagcccgtccacgctctgctcttcaaaccgcag
gaggtgcggcgccggctgctgctgctggccgagcaggtggacttcaacaaggctctgcac
ctcaacatgtacctgctcctgctgaagaagcttcctgcggaggactcgctctctccggag
gattttgatacattgcttcgtcctctagcggacctgtgttctctgcaccgtcaggaccag
gagatctgtgccgctgtcctgctgggtctgttaccctccatcatgagcctcgggaaaacc
caacacatcccagaggagatgagacacgttcaggggtctctgctgcaagtgctgtctgga
ttctgtttcctgagccaaacggggaaatgtgttgcagctgtacgagccgctttagtgaga
tgcctggttgccttgctggaggccgacccgtgttgtgagtgggcggtgttgagcatcaga
gaggaggatcgccccgtgtccgtcctcctcccctctcacctcgccgacgcacaccaccag
gtccgcatgctggtggccatgtccgtggagaggttgtttcttgagatgagaccaggacgt
ttggataagaggaagatgctgccgctgaaacaccagttgtttcttgagatgagaccagga
cgtttggataagaggaagatgctgccgctgaaacaccagcaggcggctttcgagaacgtc
tacctgaaggctcaggaaggaatgaggctcccaaggagcagctctgcagaggggcagcag
gacgaggtgttcaacaggaaggcggcgctgctgaagagtctgtctgtggtgatgtgctgc
agccccgtttgtgagaagcagtctctgttcgccctcttccagtcctacaaggagaacaac
atcgaggagcagctcatcaagaagatgttgtgcagtgtttccagagcgctgggctacagg
agcgtgaaaatgtttgtcagctctcacctgtactacctggtggctgagtggctcgcgcag
agagagtctgacgatcgctacaccctgggatccttccccttcaccctcctggaccacaac
gcactccaagagttctacaagtcctcctaccaagtgttgatcccccacctggtcttcctg
gatgactttgagcaggtgaagtcaatcggcaggtacctggagaaggactggaaagagcta
ctggcagactgtttccctaagatcatggtcaacatcctgccgtacttcgccttgtcgggc
caggatgctcaggtggctcagaagagagagaaagctcacaaagtgtacgacctgctcaaa
gacgccagctgtctgggtaaacagcaaatagacagtctgatccatagtaacctagcggac
atagtggtggagctgctgatgactctgtatgaaggaagtgaagaggagaaaggagacctg
aagtgcttcataggtgaactggaccccgtaccaaacccaccgtacttcagctcttatgtg
attaaagcgacactggactacctcagcaagtgtcacagcgcaaaccacaagtctttggtc
gccgtcttgtcaaaaacaccggtggctctttctgtcagtggtggaaagaccctgctccga
gcagtgcttcagtgtgacgaggtttcaacccgcagcctctctctgtgctgcgacctcttg
acctctgtgtgtcgcgccgcgctgcagttctgtgacgacgctctggactgccacctgcag
gtcatcgtcgggacgctcaccgctcaggtgaccagccggcccgccgtcacgcagcaggtg
ctcagcctgttgcagttcctggtgatagacaatcagcagaagttgaaaggagccatcagc
cagttggagcctttcccggacctccctgagttcagagagctgcggtctgtgcagcacaag
ctcaaatacaacactgggaccttcacactgagagaggagatagcccacttcctctctgtg
acgtcatgtgactccttacctctgacccgactggagggtctgaaggagctgacccggcag
ctgcacgacaacaaggaccagatcagagagctgctcaaagagtgccaagccgagccctct
gacagtatgctggtgaagctggtcctcagtctgctgcagctctgtaagctcgctgttaac
caccccggaggagctgacattctggaggcggcgggcagctgtctgggagagctgggtccg
gtagatttctccaccatcgccctgctgcacggcagagaccccctctatgagaaagctgtt
tctctcttcatctccactgagtcccagtgtctttacatcatcctcaactgcatgaacgat
gcactcacacaacagcgtattgaggtgaggaaagcagctggtcagtgtttgaagaacatc
ctcgcaactcagtccggagtcgacttctgggcgcaacacaaagacaacagagaccccatg
cttacctacctcaaccccttcagaaaggccaagaagacgggtgcagctgtgagtgaggag
gagagtttgggggcgaggcagaagctggagagtcaggacttctggatcccccgggcgggc
ggacacaaggcctggctgaaggctctgtgcaccgccctgctggacagcgggggggtcagg
agtgaagctctgctgctgacccgaccgctatgtctggtgagggtggactgctgtcagagg
ctgctgccgctcatcatccactccgtcctgatggacgatgtgaacggctcctggaggcag
ctgctctcctctcacattcaggacttcttcagcttttgttccagaagcgctcaggcctcc
agccgcaccgcaacacctctcaactctgactctgagtccgacgctgccagtcagggcttg
tacgataagacctctctgcgtaccatgctggctgtcatcgactatctgagacaccaacag
agatcactggaggcggatagtaagtcctgcagcacggtgtgtgactccaacttctggctg
gagctgaactacctggaggtggccaaagcggctcagtcctgttcggctcacttcaccgct
ctgctgtactccgagatctacgtggacaagatcaaagctaacatggaggagggtcggaga
accaaggccagagcttcccgtaggataaatttagaggagaacagccagagcttcaccatc
tccagcctgacggagaagagcatggaggacacgaacattagcctgcaggagctgctgatc
gaggtgtatcgcagcatcggggagcctgacagtctgtacggctgtgggggggagacgctg
accagtcccctgaccaggattcgaacctatgagcacgaggcgatgtggggtaaggccctg
aattcatacgaccttcactccaccctgccagaggtcactcgacaagtgggaattgtggag
ggcctgcagcactttggtctgagcagcatcctcgccacctacatgagggggctggagagc
gaggggctggagtggggcgccgagctgcgagagctccgcttccaggccgcctggaggaac
actcagtgggactgtgagctgacggagaggagcgagaaatccaaactgggctaccatgaa
tctgtgttctgttccctgcaagcactgagggacaaagagttctccctttttcatgaaact
atggaacaggctaggggtgcggaggtggaggagctgtgcagaggcagtctggaggcggtg
tcctctctgtacccggccctcaggaacctgcagagcatcagggagctggagagtgtgaag
cagctcttcagcaggcccttctcagacgtgtccctgcgggcggtgtgcagccgctggcgg
cagagctccctgctgctcgctgacagcgacttctctctggtggagcccatcctggccgtg
cgctctgtggcccagcagaccctgataggcagggtgggagaccccgacagctcccagtac
ctcagctctgtgctcactgaacacctgatggagctctgcaggctggcccgcacggccggg
aacacacaggttgtgtgtgtgtgtgtaacactggataaaatgaaggctctaaatgtgctt
ttgtgggtcactttttttttctcggctgacctttgccctctggtacagggtcaggacgac
ctgcggcaggacgctgtgatgcagcaggtgttcagcatgtgctccatgctgctgcagcga
aacacggacactcgcaagaggaagctcaacatccgacgatacaaggtggtgccgttctcg
cagcgcagcggggttttggagtggtgttctggcaccgtgccgatcgggcagtttctgatc
gatgccagtaaaggagcccacaagcgcttcagaccgcaggacgccaccaacctggcctgc
cgcaggaagatgaatgaggctcagaagctggcgtttgacgagaagctgcaggcgttcagc
gaggtgtgccgcagcttcaggccggtcttcaggtatttctgcatggagcgattcctggac
cccgcggtgtggacggagaaacgtctggcgtacactcgcagcgtggccacctcttccata
gtcggctacatcgtgggcctgggggaccgacacatccagaacatcctggtcgatgagcag
acggctgaactggtgcacatcgatttaggtgtggcattcgagcaggggaagatcctcccc
acccccgagaccgtccccttcagactgtccagagacatcgtggacgggatgggcatcacc
ggagtggagggggtcttcaggagatgttgtgagaagactatggaggtgatgaggaactct
caagaagctctggttactattgtcgaggtgctgctgtacgaccctctgttcgactggacc
atgaaccctctgaaggcgttctacctgcagcacgacgagcagcaggagctcaacgccacg
ctcggctccaccatggggggggaggacatggacaactcccggaagtcccgcgacagtcag
agctacaacaaggtggcggagcgggtgctgctgaggctgcaggagaagctgaagggggtg
gaggggggcacggtgctcagtgtgagggggcaggtcaacctgctcatccaacaggccatg
gaccccgaaaacctcagcagactcttctccggctggcaggcctgggtgtag
DBGET
integrated database retrieval system
