Notothenia coriiceps (black rockcod): 104964476
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Entry
104964476 CDS
T04920
Symbol
slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncc02000
]
104964476 (slc6a4)
Transporters [BR:
ncc02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104964476 (slc6a4)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
104964476
NCBI-ProteinID:
XP_010791574
UniProt:
A0A6I9PKF5
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All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MEKQDMMLTNMLNMDKGEKGRVEGPGDEEEGTQQENGRLTLADGLSEKGTKSLSSGSGQQ
VSNGFDTSTPQSPKEGPGGAACSGGTASAPGSGPGATVPPGGLRTLVVQQTSLERPRETW
SKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYLLMAIFGGVPLFYMELALGQF
HRSGCISIWKHICPIFKGIGFAICIIALYVAFYYNTIMAWALYYLLSSFRPTLPWTTCSN
SWNTANCNRYMSTDHNVSWSNSSTSPAEEFYTRQVLQVHRSEGLHQLGSVSWQLALCLLF
IFTIVYFSIWKGVKTSGKVVWVTATFPYLVLLVLLVRGATLPGAWRGVVFYLKPDWQKLL
STTVWIDAAAQIFFSLGPGFGVLLAFASYNPFHNNCYKDALITSSVNCLTSFLSGFVIFT
VLGYMAEMRQQDVGSVAKNAGPSLLFIIYAEAIANMPAATFFSIIFFLMIIMLGLDSTFA
GLEGVITAMIDEFPQLLSKRREWFVLGLVCVCFLGALSTLTYGGAFVVKLFEEYATGPAV
ITVVLLEVIAVSWFYGTNRFCNDIHLMLGFYPGCFWRICWVAICPCFLVFIIISFLAFPP
EVRLFDYHFPPWTTVLGYCIGVSSFICVPAYMVFYLLNAKGTFKERLLKSITPVPSGDQY
RDYIVTNAV
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacaagacatgatgctgacgaacatgttgaatatggacaaaggggagaaaggg
agagtggaggggccgggggatgaagaggaggggacacagcaggagaatggcagactgacg
ttggctgacggtctctcagagaaaggaaccaagagtttgagctccggttctggacagcag
gtgtccaatggcttcgatacatccacgcctcagagccccaaagaggggccggggggcgca
gcctgctccggggggacggcctccgcgcctgggtcaggccccggggccacggtgccgccg
gggggcctcaggactctggtggtccaacagaccagcttggagaggcccagagaaacctgg
agcaagaagatggacttcctgctctctgtgatcggctacgctgtggacctggggaacgtc
tggcgcttcccttacatctgctaccaaaacggaggaggtgcctttttgctgccctacctg
ttaatggcgatatttggaggcgtccctctcttctacatggagctggctctcggccagttc
caccgcagcggctgcatctccatctggaaacacatctgccccatcttcaaagggatcggc
tttgccatctgcatcatcgccctctacgtcgctttctactacaacaccatcatggcctgg
gctctgtactatctgctgtcgtcgtttcggcccaccctgccgtggaccacctgctccaac
agctggaacacagccaactgcaaccgctacatgtccactgaccacaatgtgtcatggtcc
aactcctccacctcccctgcagaggagttctatactcgccaggtgctgcaggtccaccgc
tccgaaggtctgcaccagctgggctctgtcagctggcagctggccctctgcctgctcttc
atcttcaccatcgtctacttcagcatctggaaaggagtcaagacgtctggaaaggtagtt
tgggtgactgctacttttccatacctggtcctcctggtgctgctcgtccgtggggccact
ctgcccggggcctggaggggcgtggtcttctatctcaaacccgattggcagaaactgctt
agcacaacagtgtggattgatgcagcggctcagattttcttctcactgggtccggggttt
ggcgtgctccttgcttttgccagctacaacccatttcacaacaactgctacaaagatgcc
ttgatcaccagctctgtgaactgtctgaccagcttcctgtccggcttcgtcatcttcacc
gtgttgggctacatggctgagatgaggcagcaggatgtggggagtgtggctaagaatgct
ggtcccagtctgctattcatcatttacgcagaagccatagcaaacatgcctgctgctacg
ttcttctccatcatcttcttcctcatgatcattatgttgggtctggacagcacgtttgcg
gggttggagggggtgatcacggcgatgatcgatgagttcccgcagctcctgtctaagaga
cgagagtggtttgtcctcggcctggtgtgcgtctgcttcctcggggccctctccacactc
acatatggtggagcgtttgtggtgaagctgtttgaggagtacgctacgggccccgccgtc
atcaccgtggtgctgctcgaagtcatcgccgtctcctggttctacggtaccaaccgtttc
tgtaatgacatccatctcatgcttggtttctacccgggttgtttctggaggatctgctgg
gtggccatctgcccctgcttcctggtgttcatcatcattagtttcctggccttccctcca
gaggtcaggttgttcgactaccacttccctccatggaccactgtcctgggctactgcatc
ggggtctcttcattcatctgtgtgcctgcttatatggtcttctacttgctcaatgccaag
ggaacattcaaagagcgtctgttaaagagcatcactccagtgcccagcggtgaccaatac
agagactacatagtcaccaacgcagtctga
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