Notothenia coriiceps (black rockcod): 104966793
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Entry
104966793 CDS
T04920
Symbol
grin1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04020
Calcium signaling pathway
ncc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
104966793 (grin1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104966793 (grin1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104966793 (grin1)
Ion channels [BR:
ncc04040
]
Ligand-gated channels
Glutamate (ionotropic)
104966793 (grin1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
104966793
NCBI-ProteinID:
XP_010794385
UniProt:
A0A6I9Q196
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHINDAVAVVAQSIQELFEKE
NITEPPKGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDDGDRKYAHYSILNYQKT
RLVQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVTIHQEPFVYVKPTQPDG
TCHEEMTLNGVLIKKVICTGPNETIPGNLSGRPIVPQCCYGFCVDLLIKLAMTMNFTYEV
HLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERAQYIEFSKPFKYQ
GLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEE
EEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLV
LDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAE
AIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAI
LSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIAAGIFLIFIEIA
YKRHKDARRKQMQLAFAAVNVWRKNLQPSSSLETQDDRKSGRAEPDPQKKASFRSISTNL
ASSIKRRRSSKDTQYPPTDITGQLNLSDPSVSTVV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgacgggctcggggtacgtgtggctggtgggcgagcgggagatgtcgggtaaagccctg
agcgaggcgccagacggtctgatcggcctccagctcatcaacgggaaaaatgagtcggcg
catatcaatgatgcggtggctgtggtggctcagtccatccaggagctctttgagaaggag
aatatcactgaacccccgaaaggatgtgtgggcaacaccaacatctggaaaacagggccg
ctctttaaacgggtgctgatgtcgtctaaataccccgagggcctcacaggtcgcgtggag
ttcaatgacgacggggacaggaagtacgcccattacagcatcctcaactaccagaagact
cgactcgttcaagtcggcatttacaacggaacacaggtggtaatgaacaatcagcggaag
atcatctggcctggaggagagacggagaaaccacagggcttccagatgtccactcgacta
aagatagtgacgattcaccaggagccatttgtgtatgtgaaaccaactcaaccggatgga
acatgccacgaggaaatgacattaaatggagtcttaataaaaaaggttatctgcactggg
cccaatgagaccatcccaggtaacctatcaggacgcccaattgttccccaatgttgttac
ggattctgtgttgatctccttatcaagttggctatgaccatgaacttcacctatgaggtg
cacctggtggccgatgggaaatttggaacacaggagagggtgaacaacagtaacaagaaa
gagtggaatggcatgatgggagagctcctggggggccttgctgacatgattgtagccccg
ctgactattaacaacgaacgagcccagtacatcgaattctccaagccctttaaatatcaa
ggtctcaccatccttgttaaaaaggaaatacctcgcagtacactggactcgttcatgcag
ccgttccaaagcacgctgtggctgctggtgggtctttcggtgcatgtggtggcggtgatg
ctttacctactagaccggttcagcccgtttggaagatttaaagtaaacagtgaagaagaa
gaagaagatgccctcaccttatcatctgcgatgtggttctcctggggagtgttgctgaac
tccggtattggagaaggtgcaccgcgcagcttctcagcgagaatcctaggtatggtgtgg
gccggatttgccatgataattgtggcatcctatactgccaacctggctgccttcctggtg
ttggaccgacctgaggagcgcatcaccggcatcaatgacccaaggctgagaaacccatcg
gacaagttcatctacgccacggtgaagcagagctccgtggacatctacttccggcggcag
gtggagcttagcaccatgtaccgccacatggagaagcacaactatgagagtgccgccgag
gctatccaggctgtgcgtgacaacaagctgcatgctttcatctgggactctgcggtgctg
gagtttgaagcttcgcagaagtgcgacctggtgaccacgggagagctgtttttccgttcg
ggctttggcataggcatgcgcaaggacagcccctggaaacagaatgtgtccctggccatt
ctcagttctcatgagaatggcttcatggaagacctagataaaacctgggtgagataccag
gagtgtgactcaaggagcaatgccccagccacactcacctttgaaaacatggcaggggta
ttcatgctggtggccggtgggattgcagcaggtatcttcctaatcttcattgaaatcgcc
tataagcgccataaagacgcccgcaggaagcagatgcagctggcctttgcggcggtcaat
gtttggaggaagaacctgcagccctcttcctctctagagactcaggatgataggaaaagt
ggtagagcagagcccgacccccaaaagaaagcctcttttaggtccatcagtaccaacctg
gcttccagcatcaagagacgtaggtcctccaaagacacgcagtacccacctactgacatc
acgggccagctcaacttgtctgacccgtctgtcagcaccgtggtttaa
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