Notothenia coriiceps (black rockcod): 104968105
Help
Entry
104968105 CDS
T04920
Symbol
tpr
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104968105 (tpr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104968105 (tpr)
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104968105 (tpr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Etd1
Motif
Other DBs
NCBI-GeneID:
104968105
NCBI-ProteinID:
XP_010795977
UniProt:
A0A6I9Q769
LinkDB
All DBs
Position
Unknown
AA seq
2355 aa
AA seq
DB search
MAALLLQELEPSEISKLPKTVQNKLEKVFSDQQYEIDSLKAQQEQFRVDSEQHFFEKVKQ
LAQCQEKCLSTTQEHLKLKDEFAKQVEDVKSLREKNREYESSQEKLSSEQTLLSKAKEEL
EAEKRELLRTLEKRSLQVEHLNDDFRHLNDKLAEVNTSKMALQMKFDELESAEVNIKYKE
KRMEQEKVLLNGQTSWLNGELKAKSEELLSLSRQKGNDILELKCNLENKEDELNRLKDQV
ASLKSSNEQLQKQNEDMVSKLREVKEQQATMEEKYRNELNANIKLSNLYKGAAADSEAKS
DELTLAVEELHKLLKDAGEANQALEEKLQDMNGATDKSVAELNERIQVLEKELDNTNELL
SSSTLRGPISSASVISEEQLTTMSPTAAAVSKIKPGMRLTELYTAYLESQEHLQLERLEN
KRVNKYLDDIVQEVEAKAPILKRQRDEHERMQKSVTSLSAKLEHAVMEVHRLQKEADEAN
KRSSVLERDNQRSELQLGDMAKQVRVLLIELEEARGNYVPHEDDGSSADVSSTSEVISQH
LVTFRGVEELQKQNQRLLVALRELSEAQEKEEIETSGSKRGELEQSLGKAQVELESLREQ
RGQQIKMTESIVRQRDMYRVLLAQATGFSFPQQGTPPEDFFLTSTPGRSPAAIPTSGTPT
ALVSMTTDSTEALEAKAALRQLQEVFSTYKKERMESDKLVTGQGEKLQEQLSDLHSQNAK
ISTQLEFASKRYEMLQDNVERYRKEIASLREKEQKTAAAAQKHEQTIHSLNEDLRAAKEK
LSMAEGHAQSMRKERDMLKLVESRLNQEKESLQSQQQSQNMLMTNLHAIQATLERSETDT
RQRLSDQLEKQEREISQLQKRLENEVEQRHLLSRNQEIHLMDAKRQLEIQAPLHQKTKEL
LNAAEFELKTLRMQLGSSEARHSLSSPSTPVLRGLPGSDQDREELQGRLRLAETQAEELA
VSLRAATSSMEQYRAMAQSMEESLDKEKKVTEQARSSIETRLKEAEKQHQKLEEKLLEAE
KEKHNSEEQKRRALASLEEQMENLRRSLSSAQAEHQAVLQRVAVAEAQQQQALQDSLEQA
KLAAEAQGKYEQEMLLHAADVEALRVAKAQALQAVELRLQLDERSQRVGAELLEARVSWE
EQEKIIKEEMAKMESRHDELQKQNTLLHEQIQTMSRKMADTLQRAINESPMNISLTEEGK
SQDQVLEILRFVRREKEIAESRFEVAQGETLRHRLRVEHLERELKEMQDSLSAAKERMQV
TAKTLAQHDELMKKTETMSILMETNKMLREEKNRMELELQQTQAKLQKLQSDIMPLQQAN
SELSEKSGMLQAEKKILEEDIKRWKARTQHLVSQQKDSDPEEYKRLHSEKEVHLKRIQQL
TEESTRLKVEVARTNTLTVSLQSQIQNLRDNMIKINEERNTLKKEVEAKKQELLEKVRTI
TQVKKIGRRYKTQYDELKVEHDKLVAEAAAGPSQEEEARQASVQELQSLRDSLSQAEAKT
KELEGQLENINKVVTERETEGRNAQDQASRLQAELTRLRQELQDKSTQEETLRQQMTEKE
DKTRKAIVYAKQKINHLTNSKDQLQKENEELKQQREELEVRVSALKSQYEGRLSRQEREL
RDLRGQQERQEQRDEPAEAGPSKTQEQQRSTEQRQISLKTTPAADRGSASTSEPPTANIK
PTPVATGSKQPVNPGNKPTPRASIRPMITPATVPTPTPTATVMPTTQVENQEAMQSSEGP
PVEHVTVYGSASGSVRSSSPNVQTTLASPMLNVQQTQTQATAFVQPTQQQSVSHAEPANQ
EPPPVVIEATPSSQVEWPSTSSSSSVFGTVSATPGSSMSKRPREEEESTTMLTDTDSTQE
DTSRAPIPKKLRIIQIVGPEEEVLAGDSAEAEVPTDSQDGAEASQTEEFQELDEGDEGAG
SQSVMMEQEVTLSQSGTPEPLLHEVIVIVTDTESEEEQEDEDEEEEEQDYEEEEEEEEED
EDDEEEDEEEEDDGEMVEEGEDSNEGSGDGNEAYEGDDTEGADVTDPGTETEESLGASDS
TQRPADSQTASFEGNAMEAFSTDQTITSSGSRMPQSPRRPTHQLPSRMSIALTSDLGPHA
QRNPARRQSVGRVPQLAPGVQGTSQHFFVDDDSIVPCTPTLVVPHRSEGLDNSSQVAGVP
RFRFGFSDDSPQTSSSHSDLAHLASQGGLGMFESPLFLAPHEEESGGRSVPTTPLQVTAP
VNIFSEAQSDSTEHASQSVPIVSMSTPGGAGSGEDRDDALLEPDSDRPSGDMSGESVVSQ
GDVEESGQQSDKASLPSTSQEPPSSSADASSAPPRPSRPGSSRQLQRWPEHRGGRMKRGG
QGFPSRGLHGRRFAR
NT seq
7068 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactgctgctgcaggagttggaaccctctgagatttcaaagctaccaaaaacg
gttcaaaacaagctcgagaaggttttttcggatcagcagtatgaaatcgattctttgaaa
gcgcaacaagaacagtttcgagttgacagcgagcaacacttcttcgaaaaagtgaaacaa
cttgctcagtgccaagaaaaatgtttatccacgactcaagaacatcttaaactcaaagat
gagtttgccaagcaagtggaagatgttaaaagcttgcgtgagaagaacagggaatatgaa
tcttcgcaagagaagctgtcatcagagcagactttgctgtcaaaagccaaagaggaattg
gaggcagaaaagcgagagcttttgaggacactggagaagaggtccttacaagtggagcat
ttaaatgatgacttcaggcatctcaatgataagttggctgaggtcaacacctccaagatg
gcgctgcagatgaagtttgatgaacttgaatcggctgaagtcaacatcaaatacaaggag
aagcgtatggaacaagagaaggtgctgctgaatggccaaacatcttggctgaatggggaa
ttgaaggctaagagtgaggaactgctgtccctatcccgacagaagggaaacgacatcctg
gagctgaagtgcaacctggagaacaaggaagatgagttgaatagactcaaagaccaagtg
gccagtttgaagtcttcaaatgaacaacttcagaaacagaacgaggacatggtcagcaaa
ctaagagaagtcaaggaacaacaagccaccatggaggaaaagtacagaaatgagctgaat
gccaacattaagctttccaatctatacaagggagcagcagcggattctgaggcaaaaagt
gacgagctgactctggcagtggaggaactgcataaactcctgaaggatgctggagaagcc
aaccaggctcttgaggagaagttgcaggatatgaatggtgccacagacaagagtgttgct
gagctaaatgagaggatccaggttctcgagaaagagctggacaataccaacgagctgcta
tcaagttccacacttagaggtcctattagttcagcatctgtgatatcagaagaacagctg
acaacaatgtctccaacagcagctgctgtgtccaaaatcaagcctggcatgaggctgaca
gagttgtatacagcatatttggagagccaggagcatctgcagctggagcgattggagaac
aaacgggtcaacaagtacctggatgacattgtgcaggaagtggaagccaaagcccctatc
ctcaaacggcagagggatgaacatgagcgcatgcaaaagtcggtgacaagcctttctgct
aagctggagcacgctgttatggaagttcaccgtctgcagaaggaagctgatgaagctaac
aaacgctcgtctgttctggaaagggacaaccagagatctgaactgcagctaggagacatg
gctaagcaagtgcgtgtgctgctcatcgagctggaagaggctcgtggaaactatgtgcct
catgaggacgatgggagctcagctgatgtcagcagcacatcagaagtgatcagccaacac
ttggtgaccttccgtggtgtggaggagctgcagaagcaaaaccagcgtcttctggtggcc
ctcagggagctcagtgaggcccaggagaaagaggagattgagacctctggaagcaagcgt
ggtgaactggagcagagtttgggtaaagcccaggtagagctggagtctctgagggagcaa
cgcggccaacagataaagatgactgagtccatcgtgaggcagagggacatgtaccgtgtg
ctgctggctcaggcaacaggattcagcttccctcagcaaggtacaccacctgaggatttc
ttcctgacctccacccccggacgctcaccggcagccattcccacctcaggaacacccact
gcccttgtctccatgacaacagattctactgaagccttagaagccaaggcagctttgcga
cagttgcaggaggtgttctccacctataagaaggagcgcatggagagtgacaagttagtg
actgggcagggcgagaagctccaggagcagctctcagacctccactcccagaatgccaag
atatccactcagctggagtttgcctccaagcggtatgagatgctgcaggacaatgttgag
cgctacaggaaagagattgcttccctcagagagaaagaacagaagacggctgctgccgca
cagaagcacgagcagaccatacactctttgaatgaggatttgagagctgccaaagagaaa
ctatccatggctgagggccatgctcagagcatgcgtaaggagagagacatgctgaagctg
gtggagtccaggctgaatcaggagaaggagtcactgcagagccaacaacagagccagaac
atgctgatgaccaacctccatgccatacaggccactcttgagcgttcagagactgataca
cgtcagcgtttgagtgaccagttggagaagcaggaacgagagatctcccagctgcagaag
aggctggagaacgaggtggaacagcgccacctgctcagcagaaaccaggagatccatctg
atggacgcaaagaggcagctggagatacaggctccgttacaccagaagaccaaagagctg
ctgaacgctgcagagtttgagctcaaaaccctcagaatgcaactcggcagcagcgaagca
cgtcactccctgagctccccatccacgcctgttctcagaggcttaccaggttcagatcaa
gaccgagaggagctacagggtcgcctgcggctggctgaaacccaagcagaggagctggca
gtgagcctcagggccgccacctccagcatggagcagtacagagccatggctcagagcatg
gaggaatccctggacaaagagaaaaaggtgacagagcaggcacgctcgtccatcgaaacc
cgtttgaaggaggctgagaagcagcaccaaaagctggaggagaaacttctggaggcggag
aaagagaagcacaattcagaggagcagaagagaagagccctggcctctctggaggaacag
atggagaatctcaggaggagtctcagcagtgcccaggctgagcaccaggcggtgctgcag
cgcgtggctgtagccgaagctcagcagcaacaagctctgcaagacagcctggagcaggct
aagctggcagccgaagcccaaggtaagtatgagcaggagatgttgctgcatgcggccgac
gtggaggctctgcgggtcgctaaggctcaagccctgcaggccgtggagctccgcctgcag
ctggacgagagatcccagagggttggtgctgagctgctggaggccagggtctcctgggag
gagcaggaaaagatcatcaaggaggagatggcgaagatggagagccgtcacgatgagttg
cagaagcagaacactctcctgcatgagcagatccagaccatgagcaggaagatggccgac
actctgcaacgtgctatcaatgagagtcccatgaacatctccctgactgaggagggcaaa
tctcaagaccaagtcctcgagattctcaggtttgtgcgtcgggagaaggagattgcagag
tctcgttttgaggtggcccaaggggagaccttgcgtcaccgcctgagggtggagcacctg
gaacgagagctgaaggagatgcaggacagcttgagtgccgcaaaggagaggatgcaggtc
acagcgaagaccctggcgcagcacgatgagctgatgaagaaaactgaaactatgagcatc
ctgatggagaccaacaagatgctgagagaggagaagaacaggatggagctggaacttcaa
caaacccaagcaaaattacaaaagctgcagtcagacatcatgccactgcagcaggccaac
tctgagctgagcgagaagagtggcatgctgcaggcggagaaaaagatactggaagaggac
atcaagcgctggaaagctcggacccagcatttggtgagccagcaaaaggattcggatcca
gaagagtacaagcgtctgcactcggagaaggaggtacatctgaaacgcattcagcagctc
actgaggagagtacccgactcaaagtagaggttgccaggacgaatactctcacagtgtct
ctgcaaagccagatacagaatttgcgtgacaatatgattaaaataaatgaagagaggaat
acactgaagaaagaagtggaggccaagaaacaggaactcctggagaaagtgcgaactatc
actcaggtcaagaaaattggacgtcgctacaagactcagtatgatgaactcaaggtggaa
catgacaagttggtggctgaggcggcagcaggcccatcccaagaagaggaggctcgtcag
gcctcggttcaggagctgcagagcctcagagactctctgagccaggctgaagcaaagacc
aaagagctagaggggcagctggagaacatcaacaaggtggttacggagcgtgagactgaa
gggcgaaacgcccaggaccaggcctccaggctgcaggcagagctgaccaggctgaggcag
gagctgcaggataaatccactcaggaggaaacgctgaggcagcagatgactgagaaggag
gacaagaccaggaaggccatcgtttatgccaagcagaagatcaaccatctcacaaactcc
aaagaccagcttcagaaggaaaatgaagaactgaagcaacagcgtgaggagctggaggtg
cgagtgagcgctctcaagtctcaatacgagggccgtctgagtcgacaggagagagagctg
agagacctgcgaggccaacaggagagacaggagcagagagacgagccggccgaggcgggg
cccagcaagacccaggaacagcagaggagcacagaacagagacagatcagtctgaagacc
accccagcggcagacaggggcagtgccagcacatccgagcctccaacagccaacattaag
cccacacctgtggcgacaggcagcaagcagcctgtcaatcctgggaacaaacccactccg
agagctagcatccggcccatgattaccccagccactgtgcccacgccaacacccacggct
actgtcatgccaaccacacaggtggagaatcaggaagccatgcagagtagcgagggcccc
ccggtggagcatgtgacggtgtacggcagcgccagcggctcggtgcgctcctccagcccc
aacgttcagaccaccttagcgagccccatgttgaatgtgcagcagacccagacgcaggcc
acagcctttgtccaaccaactcaacaacaaagcgtgagccatgcagagccagccaatcag
gagccaccacccgtggtcatcgaggcaacacctagctcgcaggttgaatggccttcaacg
tcctctagctcctctgtgtttgggactgtttcagcaacgccaggaagctccatgtcaaag
aggcctcgggaggaggaggaaagcaccaccatgctcactgacacggactccacccaggag
gatacctcccgggctcccatacctaagaagctacgcatcatccagatagtgggtccagag
gaggaggtgctggccggggacagtgctgaggctgaggtgccaacagacagtcaagatggt
gccgaagcaagccagacggaggagtttcaagaactggacgagggagatgagggtgctggc
tcccaatctgtcatgatggagcaagaggtcaccctgtcccaaagtggcacccctgaaccg
ctgctgcacgaagtaatcgtcatagtaacagacacagaaagtgaggaagaacaggaagat
gaggatgaagaggaagaagagcaggattacgaagaggaggaagaagaggaggaggaagat
gaagacgacgaggaggaagacgaggaggaggaagacgacggagagatggtggaggaagga
gaggacagtaacgagggcagcggagacggcaacgaggcctacgaaggagacgacacagag
ggagctgatgtaacggacccgggcacggagacggaggaaagtttgggggcgtctgactcc
acccagaggccggcagattcccagacagccagctttgagggcaatgcaatggaggccttc
tctactgatcaaactatcacaagctctggttctcggatgccccaatctccacgcagacca
acacatcagctgccctctcgaatgagcatcgccctgacatcagacctgggaccacatgcc
cagcgtaaccctgcccgtcgtcagtcagtgggaagagttcctcagctcgcccccggggtg
cagggcacttctcagcatttctttgttgatgatgacagtatagtgccctgcacccccact
ctggtggtgccgcaccgctcagaaggacttgacaattcttcccaagtggctggtgtgcct
cgcttcaggtttggtttttcagacgacagccctcagaccagctcgtcacactctgacctg
gcacatctcgcatcacaaggaggtcttgggatgtttgaaagtcccttgttcctagcacct
catgaagaggagtcgggtggacgcagtgttcccaccacaccattacaagtgacagcacca
gtaaatatcttctcagaggctcagtccgactccactgagcacgcctcccagtcggttccc
atagtgagcatgtccacgccaggaggcgccggctcaggggaggacagagacgacgccctc
ctggagccagactctgatcggcccagtggagatatgtcaggagaatcagtggtctctcag
ggggatgtggaggagtcaggtcagcagtccgacaaggccagcctcccctccaccagccag
gagcccccctccagctccgcagatgcaagcagtgctccacctcgaccctccagacctgga
tcaagcagacagctgcagcgctggcccgagcaccgtgggggccgcatgaagagaggaggt
cagggatttccttctcggggtttacacggaagacgatttgcgagatga
DBGET
integrated database retrieval system
