Nocardiopsis changdeensis: KGD84_09560
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Entry
KGD84_09560 CDS
T08932
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
ncg
Nocardiopsis changdeensis
Pathway
ncg00730
Thiamine metabolism
ncg01100
Metabolic pathways
ncg01240
Biosynthesis of cofactors
ncg04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
KGD84_09560 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
KGD84_09560 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncg03016
]
KGD84_09560 (thiI)
Enzymes [BR:
ncg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
KGD84_09560 (thiI)
Transfer RNA biogenesis [BR:
ncg03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
KGD84_09560 (thiI)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
QUX24491
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Position
complement(2080111..2081391)
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AA seq
426 aa
AA seq
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MSASLESAPVPVGGAGDGLGELCVLMKLGEIVLKGSNRKLFERRLHNNIRSSVRDLGEIR
VSQRGSGVIIVRKPGASDLEVAEIADRMANVMGVVWVHLVRRVPKDLAAVTDVAVRSMEG
REGTFAVRARRRDKRFEMTSSELAGYLGSEIIKAHGYPVNLKRPDNTLYVEVDKDEAFVF
TDGVPGQGGLPAGMSGRGLVLMSGGIDSPVAAHRMIRRGLKVDFLHFSGMPFTGPESIYK
AYSLVRQLDRYQVGSRLFVIPFGKAQQQLKSSGIERLQIVAQRRLMLKTAEVLADDLKAE
CLITGDALGQVSSQTMTNLTALDDAVDLPILRPLIGMDKTEIMDQARRIGTLSISELPDE
DCCTMLTPRQVETAAKIPDLRQIEKRLDAEELAEYLVTTAQVHKPSFLGEAAPARLEPAK
AAAVRV
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgtcgcttgagtccgcgccggtccccgtcggaggagccggggacgggctgggc
gaactctgcgtgctcatgaagctcggcgagatcgtcctcaagggctccaaccgcaagctg
ttcgagcgccgcctgcacaacaacatccgctcgtccgtgcgcgacctgggcgagatccgc
gtctcccagcgcggctccggcgtgatcatcgtgcgcaagcccggcgcctccgacctcgag
gtcgccgagatcgccgaccgcatggccaacgtcatgggcgtcgtctgggtgcacctggtg
cgccgggtgcccaaggacctggccgcggtcaccgacgtggccgtgcgctccatggagggc
cgcgagggcaccttcgcggtgcgcgcccgccgccgcgacaagcgcttcgagatgacctcc
tccgagctggccgggtacctgggctcggagatcatcaaggcgcacggctaccccgtgaac
ctcaagcgccccgacaacaccctgtacgtcgaggtggacaaggacgaggcgttcgtcttc
accgacggcgtccccgggcagggcgggctgcccgccgggatgagcggccgcggcctggtc
ctgatgtcgggcggcatcgactcgccggtggcggcgcaccggatgatccggcgcggactc
aaggtggacttcctgcacttctccgggatgccgttcaccggcccggagtcgatctacaag
gcctacagcctggtccgccagctggaccgctaccaggtgggctcgcgcctgttcgtgatc
cccttcggcaaggcccagcagcagctcaagagctccgggatcgagcggctccagatcgtc
gcccagcggcggctcatgctcaagaccgccgaggtgctcgccgacgacctgaaggccgag
tgcctgatcaccggcgacgcgctgggacaggtctccagccagaccatgaccaacctcacg
gcgctggacgacgcggtggacctgcccatcctgcgcccgctgatcggcatggacaagaca
gagatcatggaccaggcccgccggatcgggaccctgtccatctcggagctgcccgacgag
gactgctgcaccatgctgaccccgcgccaggtggagacggcggccaagatccccgacctg
cgccagatcgagaagcgcctggacgccgaggagctggccgagtacctggtgaccaccgcc
caggtgcacaagcccagcttcctgggcgaggccgccccggcccggctggagcccgccaag
gccgcggcggtcagggtctga
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