KEGG   Nitrosopumilus cobalaminigenes: C5F47_04015
Entry
C5F47_04015       CDS       T06688                                 
Name
(GenBank) DNA-directed RNA polymerase subunit K
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
ncl  Nitrosopumilus cobalaminigenes
Pathway
ncl03020  RNA polymerase
ncl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ncl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    C5F47_04015
  09124 Replication and repair
   03420 Nucleotide excision repair
    C5F47_04015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ncl03021]
    C5F47_04015
   03400 DNA repair and recombination proteins [BR:ncl03400]
    C5F47_04015
Transcription machinery [BR:ncl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     C5F47_04015
  RNA polymerase III system
   RNA polymerase III
     C5F47_04015
  RNA polymerase I system
   RNA polymerase I
     C5F47_04015
DNA repair and recombination proteins [BR:ncl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      C5F47_04015
SSDB
Motif
Pfam: RNA_pol_Rpb6 Herpes_UL14 YqzH
Other DBs
NCBI-ProteinID: QLH02779
UniProt: A0A7D5R297
LinkDB
Position
complement(685416..685949)
AA seq 177 aa
MIRLYNVLRKFSYLSKVEDPAIIEAPQPEEELDAEIEENAGLNKALDTYRKLIDRKDLVE
PLTEKEQDSLEKRIKEIENREVVEKIEEHDPVEIPCEKNKITIGPPTLTRFEKARIMGAR
ALQLSLGAPPFIPIPKSARISLDISMEELEERVIPITIRRVLPNGDYQNIPIDYFEK
NT seq 534 nt   +upstreamnt  +downstreamnt
atgattagattatataacgttttaaggaaattttcttacttgtctaaagttgaagatcct
gcaatcattgaagcaccacaacctgaagaggagcttgatgcagaaatagaagaaaacgca
ggattaaacaaagcattagatacatatcgaaaattaatcgatagaaaagatcttgttgaa
ccattaactgaaaaagaacaagacagtttagaaaaaagaattaaagaaattgaaaataga
gaagtcgtagaaaaaattgaagagcacgatccagtagaaatcccttgtgaaaaaaacaaa
atcacaattggaccaccaacattaactagatttgaaaaagcaagaattatgggagcaaga
gcattacaattatcattaggagcaccaccatttattccaattccaaaatcagcaagaatt
tcactagacatatccatggaagaattagaggaaagagtaattccaatcacaattagaaga
gtattaccaaatggagattatcaaaatattccaattgattattttgagaaataa

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