Nitrosopumilus cobalaminigenes: C5F47_06200
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Entry
C5F47_06200 CDS
T06688
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
ncl
Nitrosopumilus cobalaminigenes
Pathway
ncl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ncl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C5F47_06200 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ncl01007
]
C5F47_06200 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncl03016
]
C5F47_06200 (lysS)
Enzymes [BR:
ncl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
C5F47_06200 (lysS)
Amino acid related enzymes [BR:
ncl01007
]
Aminoacyl-tRNA synthetase
Class I (A)
C5F47_06200 (lysS)
Transfer RNA biogenesis [BR:
ncl03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
C5F47_06200 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
Anticodon_2
PolyA_pol_RNAbd
tRNA-synt_1g
tRNA-synt_1
SesA
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
QLH03168
UniProt:
A0A7D5M2T6
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All DBs
Position
1036786..1038375
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AA seq
529 aa
AA seq
DB search
MVEQETIGKGTWIDKLASELLEREKALGRNTDLLRVESGLGASGIPHIGSLGDAVRAYGV
KLALENLGYKSELIAYSDDLDGLRKIPEGMQKFGLEEHIAKPVSLIPDPYGCHDSYGMHM
SSILLEGLDKVGIKYEFRRAVDTYKQGLLKDQIHTILQNSTKIGDKISELVGQEKYQKYL
PYFPVCANCNRLYTAEATEYIADERKVKYTCHDAEIGGKMVKGCGHIGEADIGKDLGKLA
WKVEFAARWTAFDIRFEAYGKDIMDSVKVNDWVADEILGFPHPHHVKYEMFLDKGGKKIS
KSLGNVITAQKWLEFGSPKSILLLLYKRITGARELGFDDIPGLMAEYNELEDIYFGRIKV
DNQAKLTKSKGLFEYVNLLNPPKQSSTHVNYRLVIELAKIFKENRAERVMKKLLDYGVIK
NPEPEIEKLIELAGNYSDEFDEQEKTEVELDDTAKKALKLLVDELGGDKELEDIQNTIYQ
IAKSNDVQPKDFFKILYQIILGTSRGPKIGPFISDIGRKQVAKTLSEYT
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggtagagcaagaaacaatcggcaaaggaacttggattgataaattagcatcagagtta
cttgaacgtgaaaaagcacttggaagaaatactgatcttctaagagttgaaagcggtctt
ggagcatcaggaattccacatattggtagtttgggggatgcagtcagggcatacggtgta
aaattagcattagagaatttaggatacaaatcagaattaatcgcttattcagatgatctt
gatggattgagaaaaattccagaaggcatgcaaaagtttggtttagaagaacacattgca
aaacctgtttcactcattccagatccttacggatgtcacgactcttatggaatgcacatg
agtagtattcttttagaaggattagacaaagttggaataaaatacgaattcagaagggca
gttgatacttacaaacaaggattactaaaagatcaaatccacacaatattacaaaacagt
accaaaattggagataaaatttcagaactagtaggtcaggaaaaatatcaaaaatatcta
ccatatttccccgtatgtgcaaattgtaatcgtctctatacagcagaagctactgaatac
attgcagatgaaaggaaagtaaagtacacttgtcatgatgcggaaataggtggaaaaatg
gtcaaaggatgtggccacataggagaagcagatattggaaaggatcttggaaaattagcc
tggaaagtagaatttgcagcaagatggactgcttttgacattagatttgaagcatatgga
aaagacattatggattcagtcaaagtcaatgattgggtagcagatgaaattttaggattt
ccacatcctcatcatgtaaaatatgaaatgttcctagacaagggaggaaaaaagatttca
aaatcattaggcaatgtaatcactgcacaaaaatggttagaatttggttctccaaaatca
attctattattactatacaaaagaattacaggtgcaagagagttaggatttgatgacatt
ccagggttaatggcagaatataatgaattagaagatatttactttggtagaatcaaagta
gacaaccaagcaaaattaacaaaatcaaaaggattgtttgaatatgtgaatctcctaaac
cctccaaaacaatcaagcacacatgtaaactataggctagttattgaattggcaaaaatt
ttcaaagaaaacagagcagagagagtaatgaaaaaattattagattatggtgtaatcaaa
aatccagaaccagaaatagaaaaactcattgaacttgctggaaattattctgatgagttc
gatgaacaagaaaaaacagaagtggaattagatgatactgcaaaaaaggcattaaaatta
ctagttgatgaattaggaggagataaagaactagaggatattcaaaatacaatataccaa
attgcaaaatcaaatgatgtacaacctaaagatttctttaaaatattatatcaaataatt
cttggaacttcaagaggtccaaagatagggccattcatttcagacattggaagaaaacaa
gtagcaaaaacactttcagagtatacataa
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