Nitrosopumilus cobalaminigenes: C5F47_06750
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Entry
C5F47_06750 CDS
T06688
Name
(GenBank) DNA-directed RNA polymerase
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
ncl
Nitrosopumilus cobalaminigenes
Pathway
ncl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ncl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C5F47_06750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncl03021
]
C5F47_06750
Enzymes [BR:
ncl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C5F47_06750
Transcription machinery [BR:
ncl03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
C5F47_06750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
S1_2
BPL_C
Motif
Other DBs
NCBI-ProteinID:
QLH03264
UniProt:
A0A7D5R6F6
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All DBs
Position
1125446..1126042
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AA seq
198 aa
AA seq
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MFSISTLVDVVRIPPSLFGTTLKKAAVNILKEKYESMINADLGYIIMILDAKVDEMGKMI
AGDGGTFHKVEFEALTFYPKLQEIVQGEIVDITDFGAFVRIGPTDALLHLSQVMDDYLKS
DVKSGMILANQSGRTLKVGSTLRARITAVSLGKAAAMGKIGITCRQPFLGADEWIVEEIK
KASGGKEEPAKEEKVEAS
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
ttgttttctatatctaccctagttgatgttgttaggattcctccaagcttatttggaact
acactcaaaaaggctgcagtaaacattctcaaagaaaagtacgagagtatgattaatgca
gatttaggatatatcattatgattttagatgctaaagttgacgaaatgggaaagatgatt
gcaggagacggtggaactttccataaagttgaatttgaagcattgacattttatccaaaa
ttacaagaaattgttcaaggtgaaattgtagatattactgactttggggcatttgtaaga
attggtccaactgatgctttactgcacttgtcacaagtgatggacgattatctaaagagt
gatgttaaatctggaatgattttagcaaatcaaagtggtagaacactaaaagttggctct
acacttcgtgcaagaatcactgcagtatcattaggaaaagctgctgcaatgggtaagatt
ggaatcacatgtagacaaccattccttggtgcagatgaatggattgtagaagaaattaag
aaagccagtggtggcaaagaagagccagcaaaggaagaaaaagtagaggcaagttag
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