Nymphaea colorata (blue-petal water lily): 116259822
Help
Entry
116259822 CDS
T07418
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol00900
Terpenoid backbone biosynthesis
ncol01100
Metabolic pathways
ncol01110
Biosynthesis of secondary metabolites
Module
ncol_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
116259822
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ncol01006
]
116259822
Enzymes [BR:
ncol01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
116259822
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
116259822
2.5.1.29 geranylgeranyl diphosphate synthase
116259822
Prenyltransferases [BR:
ncol01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
116259822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
116259822
NCBI-ProteinID:
XP_031493621
LinkDB
All DBs
Position
9:complement(12546840..12548747)
Genome browser
AA seq
357 aa
AA seq
DB search
MASSSPLPPHICFPSTPGRRRPHRLHPLNSFSRSFPQLQTSRPNLSIPASLSSPPPSTTR
FDLQTYWTSLIAEIDQQLEKAVPLRYPESIHEAMRYSVLARAKRAPPIMCIAACELVGGH
RSHAFPTACALEMVHSASLIHDDLPCMDDDPQRRGRPSNHTVFGVDMAVLAGDALFPLGF
EHMVSHTPREVPADRVLAVVAEIARTVGSTGMVAGQYLDLKLADANGGEGQDMDLAWFIK
EKKFGEMAECSAVCGGLLGGASEEEVERLRRYGRAVGVLYEVVEDMMESEKLRGKEVGGE
RKWNYVRVYGLERARELVQRLKNEAKRELSGFEGDGVVPLYSFVDYAVDRNFQLITD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttcctcgcctctccctccccacatctgcttcccatccacaccaggaaggcga
cgccctcaccgccttcacccgttgaattccttcagcagaagctttccccaactccagaca
tccagacccaatctctccattccggcatcgctgtcatcgcctccgccatcaacgacacgc
ttcgatctgcagacttattggacgtccctcatagcggagattgaccagcagctggaaaag
gcggtgccgctgcgctacccagagagcatccacgaggcgatgcgctactccgtgttggcg
cgggcgaagagggctccgcccataatgtgcatcgccgcctgcgagctcgtcggcggccac
cgctcccacgctttccccaccgcctgcgcgctcgagatggttcactccgcgtccctcatt
cacgatgacctcccctgcatggacgacgatccccagcggcgcggccgcccttccaaccac
accgtcttcggcgtggacatggccgtcctagccggagacgccctcttccctcttgggttc
gagcacatggtgtctcataccccgcgggaggtgccagccgaccgcgttctcgcggttgtc
gccgagatagcccgcaccgtcggctccaccggcatggtcgccggtcagtacctcgatctc
aagctcgccgacgccaatggtggagaaggacaggacatggacctcgcctggttcatcaag
gagaagaagttcggagagatggcggagtgctccgccgtgtgtggtggattgttgggggga
gcgagcgaggaagaggtggagaggctgaggaggtatggtcgggccgtgggagtgctgtat
gaggtggtggaggacatgatggagagtgagaagctgcggggaaaggaggttggtggcgag
aggaagtggaattatgtgagggtttatgggttggagagggccagggagttggtgcagcgg
ctgaagaacgaagccaagagagaactctctggctttgagggggatggggttgttcccctc
tacagctttgttgattatgctgttgacagaaattttcagctgatcacagactag
DBGET
integrated database retrieval system
