Nymphaea colorata (blue-petal water lily): 116261392
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Entry
116261392 CDS
T07418
Name
(RefSeq) ABC transporter D family member 1
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol02010
ABC transporters
ncol04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116261392
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
116261392
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncol02000
]
116261392
Enzymes [BR:
ncol01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
116261392
Transporters [BR:
ncol02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
116261392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_23
SMC_N
AAA_16
nSTAND1
Mg_chelatase
RsgA_GTPase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
116261392
NCBI-ProteinID:
XP_031495991
LinkDB
All DBs
Position
9:24857776..24879983
Genome browser
AA seq
1336 aa
AA seq
DB search
MPSLQLFQLTEHGRHFGPSRRRALAVATAVFLTGGTAAYLHSRRCRGHSQNYFRTKTELD
SGAEKSNNVDTNGPHHQGKLQKRSGLKSLHILARILLSRIGEKGIQNLVSLVAIAVVRTA
MGNRLAKVQGFLFRAAFLGRLPSFIRLIAENLLLCFLQSTLFSTSKYLTGVLGLRFRRIL
TELIHADYFENMAYYKMSHVDGRISSPEQRIASDIPKFCSELSELVHEDSMAVADALLYT
WRLCSYASPKYFFWIIAYVLGVGFVIRNFSPAFGKLMSKEQQLEGDYRQLHSRLRTHAES
IAFYGGEKREASHIRDQFRTLVGHLNLVLHDHWWFGMVQDFLLKYLGATVAVVLIIEPFF
SGKLKPDTSTLGRADMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMVI
AKELAAHDKSLQNSKTKTYQSEANYIEFSGVKVVTPTGNVLVEDLTLKVEQGSNLLITGP
NGSGKSSLFRVLGGLWPLVSGHIVKPGLSSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTA
REETNPLTYDGMVDLLKNVDLEYLLERYPLDKEINWGDELSLGEQQRLGMARLFYHKPKF
AILDECTSAVTTDMEERFCSKVRAMGTSCITISHRPALVAFHDMVLSLDGEGGWSVRYRR
ENVSNAEGTRFNLLEASETGRQKDAMVVQKAFASESKDTSFGSSKFSDSYIKEVLARSTI
ADYRLQLPNVPLLQKAPKSAAIRVANMLKILVPSLFDKQGSKLFAVAVLVISRTWVSDRI
ASLNGTSVKFVLEQDKRAFIRLIGISVLQSAASAVLAPSLRYLTAKLALGWRIRLTQHLL
RSYFKNNAYYKVFYMSSKDLDADQRITHDVEKLTTELSGLVTGMVKPTVDIIWFAWRMKM
LTGRRGVAILYTYMLLGLGFLRIASPDFGDLSSKEQQLEGIFRFMHSRLRTHAESVAFFG
GGTRERAMVESKFRELLQHSRLLLKKKWLFGILDDFVTKQLPHNVTWGLSLLYAMEHKGD
RALTSTQGDLAHALRFLASVVSQSFLAFGDILELHKKFLELTGGINRVFELEELLDAAQL
AVPSDSLSERAVFPSPTDVISFSDVDIISPAQKVLARQLSFEITPGKSLLVTGPNGSGKS
SIFRVLRGLWPIVSGRLIQPRQSSHEVQGSCDVFYVPQRPYTCLGTLRDQIIYPLSQHEA
EQMVSKISGSGDRSHPAQLLDARLCFVLQNVRLTYLVEREEGGWDATQSWEDVLSLGEQQ
RLGMARLFFHHPRFGILDECTNATSVDIEEHLYKLAKEMGITVVTTSQRPALIPFHSVEL
RLIDGEGNWELYLINS
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgccttctctccaactgtttcaattgacagagcatggtcggcattttgggccatcgaga
aggagagctcttgctgttgccactgctgtttttcttactggaggtactgctgcgtatctg
cattcccggagatgcagaggtcattcacaaaattattttagaacgaagacagagcttgat
agtggtgctgaaaaatcaaataatgttgatacaaatggtcctcaccatcaaggaaaatta
cagaagagaagtggattgaaatcgttacatattctggccaggattcttctttcacgtatt
ggtgaaaaagggattcagaacctcgtatctctggttgccatagcagtagtacgaactgct
atgggcaataggttggcgaaagttcaaggctttctgtttcgggctgcttttcttgggcgc
ttaccttcttttattcgtcttattgctgaaaacctgcttttatgctttcttcagtctaca
ttgttttcgacgtcaaagtatttaacaggagtgttgggtctgcgattcagaaggatattg
actgagcttattcatgctgattactttgagaatatggcgtattacaagatgtcacatgta
gatggtcgaataagtagtccagaacagaggattgcaagtgatataccaaaattttgttcg
gagttgagtgagcttgtacatgaggactcaatggctgttgccgatgcacttctttatacc
tggcgcctgtgttcttatgccagtccaaaatattttttttggataatagcatatgttctt
ggtgtgggttttgtgataagaaatttttctcctgcttttgggaagctaatgtccaaggag
cagcaattagaaggagattaccgacagttgcattctcggttaaggacccatgcagaaagt
attgcattttatgggggtgaaaaaagggaagctagccacatacgtgatcagttcaggaca
cttgttggtcatctgaatcttgtcctccatgaccactggtggtttgggatggttcaagac
tttttgttaaagtacctgggtgctactgttgctgtcgtccttattattgaaccatttttt
tctggaaaattgaagccagacacttccactcttggacgggcagatatgttaagcaatctg
agataccatacaagtgttatcatttcactctttcaatcactgggtacactttccataagt
tcacggcgtcttaatcgtctaagtggttatgctgatcgtatacatgaattaatggtgatt
gcaaaggagctggctgctcatgataaatctcttcaaaatagtaaaactaagacatatcaa
agtgaagccaattatattgaattttcaggagtgaaggtagtaactccaactggcaatgtt
ctcgtggaagatttaactcttaaagtggaacagggctctaatctgttgatcacaggacca
aatgggagtgggaaaagttctctttttcgagtacttggaggcctttggccattggtttct
ggccatattgttaaacctgggctgagttcagacctcaacaaagagatattttatgtgcca
caaaggccatatacagctgtgggaacacttcgtgatcagttgatttatcccctcactgca
agggaggagactaacccacttacatatgatggcatggttgatctactgaaaaatgttgat
ctggaatacttgttggaacgatacccacttgacaaggaaataaactggggtgatgaactt
tcccttggggagcaacagagactaggaatggctaggctattttatcataaaccaaaattt
gccattctagatgaatgcacgagtgctgtcacaactgacatggaagagcgcttttgttct
aaagtccgggccatggggacatcatgtatcactatatcacacaggcctgcccttgtggct
ttccatgatatggtcctgtccttggatggagaaggtggttggagtgtccgttataggagg
gagaatgtgtctaatgccgagggaacaaggttcaaccttctagaagcatctgaaacaggt
cgccaaaaagatgcaatggttgtccaaaaggcttttgcatctgaaagcaaggatacttca
ttcggcagctcaaagttcagtgattcatacataaaggaagttctggccaggtcaacaatt
gctgattataggttgcagttaccgaatgttcctctgctacaaaaggcaccgaaaagtgca
gcaattagggtggccaatatgcttaaaattttggtgccttctctattcgataaacagggg
tcaaaattgtttgctgtggctgtactggttatatctcggacatgggtttcagataggatt
gcttctttaaatggtactagcgtaaagttcgtgctggagcaggataagcgagcctttatt
cggttaattggcattagtgtccttcagagtgctgcatcagctgttcttgcaccttccctc
agatacttgactgcaaaacttgctctagggtggcgtatccgtttgacccaacatttgttg
aggagctatttcaagaataatgcatattacaaggtattttacatgtcaagtaaagacttg
gatgcagaccagagaataacacatgatgtagaaaagctgacaactgagttgtctgggctg
gttacaggaatggtaaagccaactgttgatatcatctggtttgcatggagaatgaagatg
cttactggccgaagaggagttgctatattgtacacttacatgctattgggtcttggtttc
ttaaggattgccagtccagactttggtgacctttctagcaaggaacaacagctcgaggga
atatttagatttatgcactcgagacttcgaactcatgcagagtctgttgctttctttggt
ggtggtacccgagaacgagctatggttgaatcaaaatttcgggagttgctccagcactct
cgtcttttactaaagaaaaagtggttatttggtatattggatgactttgttacaaagcaa
cttccacataacgtgacatggggtttgagtttgttatatgctatggaacataagggtgat
cgagctttaacctctactcaaggggatttggcacatgcattacggttcttggcttcagtt
gtatcacagagctttcttgcatttggcgacattcttgagttacacaagaagtttcttgag
cttactggtggcatcaatcgagtctttgagttggaagagcttctagatgctgcccaactt
gctgttccttctgattcactatccgagagggcagtcttcccctctcctacagatgtaatc
tccttctcagatgtggatataatcagtccagcccagaaggtgctagcaaggcagctttca
tttgaaataactccaggaaaaagcctgcttgtcactggtcccaatggaagtggaaaaagc
tctatatttagggtcctccgtggtttatggcccattgtgagtgggagactcattcagccc
aggcaaagttcacatgaagttcaaggatcatgtgatgttttttatgttcctcaacggcca
tatacatgtttaggaacattgagggatcagattatttatccactctctcagcatgaagcg
gagcagatggtgtcaaagatctctggatcaggcgatagatctcatccagctcaactgttg
gatgctcgattatgttttgttcttcagaatgttcgactgacctaccttgtagaaagggag
gagggtggctgggatgctacccaaagttgggaagatgttctttctcttggggagcaacaa
aggctcggcatggcacggttattcttccaccatccgagatttggaattcttgatgaatgt
accaatgcaacaagtgttgacattgaagagcacctttacaaacttgccaaggagatggga
attactgttgtgactacttctcaaaggcctgccttgataccattccattcggtagaattg
agattgattgatggtgaaggtaactgggaactgtatttgatcaacagctga
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