Candidatus Nanohalobium constans: LC1Nh_0780
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Entry
LC1Nh_0780 CDS
T07315
Symbol
rpoE1
Name
(GenBank) DNA-directed RNA polymerase subunit E'
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
ncon
Candidatus Nanohalobium constans
Pathway
ncon03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ncon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LC1Nh_0780 (rpoE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncon03021
]
LC1Nh_0780 (rpoE1)
Enzymes [BR:
ncon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LC1Nh_0780 (rpoE1)
Transcription machinery [BR:
ncon03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
LC1Nh_0780 (rpoE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
BPL_C
RNA_pol_Rbc25
Motif
Other DBs
NCBI-ProteinID:
QGA80664
UniProt:
A0A5Q0UGE4
LinkDB
All DBs
Position
complement(636709..637290)
Genome browser
AA seq
193 aa
AA seq
DB search
MYKRLTIQDSVRVPPQHLGENVSDSVRDGLREEVEGDIVEDVGVVIGVEDVNSVEGGDIE
PEDAGVHYQVEYEAIVYDPELHEVVTGEVVDITDFGAFIRIGPFDGLCHVSQVMDEYVNL
DEDAQMLISEDQDRALEVGDTLTTRIIAVSLGKKDTNKINLTMRQPGLGKEEWIEMYEEE
KAEQEQEDEEEEE
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaagattaacaattcaggattccgtccgtgttccaccgcagcatcttggtgaa
aatgtttcagacagcgtcagagatggccttagagaagaggttgaaggtgacatcgttgag
gatgtcggcgttgttatcggtgtcgaggatgtgaacagtgttgaaggcggcgatatcgag
cctgaagacgcaggggttcactaccaggtagaatacgaagcaattgtctacgatccagaa
ctgcatgaagtggttactggtgaagtagttgatattacagatttcggagcattcatccgt
atcgggccattcgacggtctatgccatgtttcacaggtaatggatgaatatgtcaacctg
gacgaagatgctcaaatgcttatctcagaagatcaggacagagcattggaagtcggtgac
acacttacaacaagaattatcgcagtttctcttggtaagaaagatactaataagattaac
ctgacgatgcgtcagccaggactcggtaaagaagaatggatcgaaatgtacgaagaagaa
aaagccgaacaagaacaagaagacgaagaagaggaagagtaa
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