Naumovozyma castellii: NCAS_0A12040
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Entry
NCAS_0A12040 CDS
T02233
Symbol
NCAS0A12040
Name
(RefSeq) hypothetical protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
ncs
Naumovozyma castellii
Pathway
ncs03020
RNA polymerase
ncs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCAS_0A12040 (NCAS0A12040)
09124 Replication and repair
03420 Nucleotide excision repair
NCAS_0A12040 (NCAS0A12040)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncs03021
]
NCAS_0A12040 (NCAS0A12040)
03019 Messenger RNA biogenesis [BR:
ncs03019
]
NCAS_0A12040 (NCAS0A12040)
03400 DNA repair and recombination proteins [BR:
ncs03400
]
NCAS_0A12040 (NCAS0A12040)
Transcription machinery [BR:
ncs03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
NCAS_0A12040 (NCAS0A12040)
Messenger RNA biogenesis [BR:
ncs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NCAS_0A12040 (NCAS0A12040)
DNA repair and recombination proteins [BR:
ncs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
NCAS_0A12040 (NCAS0A12040)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
RNA_pol_Rbc25
MSSS
Motif
Other DBs
NCBI-GeneID:
11526771
NCBI-ProteinID:
XP_003674143
UniProt:
G0V8G4
LinkDB
All DBs
Position
1:complement(2386247..2386762)
Genome browser
AA seq
171 aa
AA seq
DB search
MFFIKDLSLNITLHPSFFGPRMKQFLKTKLLQEVEGSCTGKFGYILCVLDYDKIEIERGR
ILPTDGSAEFQVKYRAIVFKPFKGEVVDGTVVSCSQHGFEVQVGPMKVFVTKHLMPSDLN
FNAGSNPPSYQSSEDVITIKSRIRVKIEGCISQVSSIHAIGSIKEDYLGAI
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcataaaggacctatcattaaatataaccctccacccatcattcttcggtccc
cgaatgaaacaattcctaaagacaaaactactacaagaagtagagggctcctgtacgggg
aaattcggatacatcctctgtgtcctagactacgacaagattgaaatcgaacgtgggaga
atcctccccacggatggatctgcggaatttcaagtcaaatacagagccatcgtcttcaaa
cctttcaagggtgaagtagtggatggtactgtggtgtcttgctcgcaacatgggttcgaa
gtccaagtgggacccatgaaagtgttcgttactaaacatttaatgccctcggatttgaat
tttaatgcaggttctaatccgccaagttatcaaagttcagaagatgttattactataaag
agtaggattagagtcaagattgaagggtgtatcagtcaagtcagttccattcatgccatt
ggaagtattaaggaggattatttgggtgccatttaa
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integrated database retrieval system
