Naumovozyma castellii: NCAS_0E01830
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Entry
NCAS_0E01830 CDS
T02233
Symbol
NCAS0E01830
Name
(RefSeq) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
ncs
Naumovozyma castellii
Pathway
ncs03020
RNA polymerase
ncs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCAS_0E01830 (NCAS0E01830)
09124 Replication and repair
03420 Nucleotide excision repair
NCAS_0E01830 (NCAS0E01830)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncs03021
]
NCAS_0E01830 (NCAS0E01830)
03400 DNA repair and recombination proteins [BR:
ncs03400
]
NCAS_0E01830 (NCAS0E01830)
Transcription machinery [BR:
ncs03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
NCAS_0E01830 (NCAS0E01830)
DNA repair and recombination proteins [BR:
ncs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
NCAS_0E01830 (NCAS0E01830)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
11527155
NCBI-ProteinID:
XP_003676613
UniProt:
G0VFI7
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All DBs
Position
5:355752..356708
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AA seq
318 aa
AA seq
DB search
MSEAGPQVKIREATKDNVDFILSNVDLALANSFRRVMIAEIPTLAIDSVQIETNTTVLAD
EFIAHRLGLIPLQSLDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYAKDLVI
VSNLLGRNIGHPIIQDREGNGVLICKLRKGQELKITCIAKKGIAKEHAKWGPAAAIEFEY
DPWNKLKHTDYWYEQDATKEWPNSKNCEYEDPPNEGELFDYKAKAETFYMNVETVGSIPV
DQVVVRGVDTLQKKVASILLALTQMDQEKVNFATNPNGVSGREGMMNGGDNDVNMDGGME
QNSYANVANPGGAYDNAW
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcaggaccacaagtaaaaattagggaagctacgaaagataacgtggatttt
atcttatctaatgtggatttagcattagctaattccttccgtagagtgatgattgctgaa
atccccaccttagctattgattcagttcagatagaaacaaatactaccgtgctggctgat
gaatttattgctcacaggttagggttgattccattacaaagtttggatattgaacagctg
gaatatagtcgtgattgtttctgtgaagatcattgtgataaatgttctgtcgtgttaact
ttacaagcatttggggaaagtgagagtactaccaatgtgtatgccaaggatttagtgatt
gtttccaatttacttggtcgtaatattggtcatccaatcatacaggatagagaagggaat
ggtgtgttaatatgtaaactaagaaaaggacaagaattaaaaataacgtgtattgccaag
aaggggatagccaaggaacatgcgaaatggggtcctgcagcagccatagaatttgaatac
gatccatggaataaattaaagcatactgactactggtacgaacaagatgctactaaggaa
tggccaaattctaagaactgtgagtacgaagaccctccaaatgaaggcgaattatttgat
tataaagctaaggccgaaacattttatatgaatgtggaaactgtcgggtccatacctgtg
gaccaagttgttgtcagaggtgtagatacacttcaaaagaaagttgcatctatattatta
gcattaacacaaatggaccaagaaaaagttaattttgccacgaatcccaacggtgtcagt
ggccgtgagggcatgatgaatggaggagacaatgatgttaatatggatggtggaatggaa
caaaactcatacgcaaatgtcgctaatccgggaggtgcatatgataatgcttggtga
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