Naumovozyma castellii: NCAS_0H02040
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Entry
NCAS_0H02040 CDS
T02233
Symbol
NCAS0H02040
Name
(RefSeq) hypothetical protein
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ncs
Naumovozyma castellii
Pathway
ncs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCAS_0H02040 (NCAS0H02040)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncs03021
]
NCAS_0H02040 (NCAS0H02040)
Enzymes [BR:
ncs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCAS_0H02040 (NCAS0H02040)
Transcription machinery [BR:
ncs03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
NCAS_0H02040 (NCAS0H02040)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
11528941
NCBI-ProteinID:
XP_003677861
UniProt:
G0VJ35
LinkDB
All DBs
Position
8:complement(393711..398093)
Genome browser
AA seq
1460 aa
AA seq
DB search
MKEVVVSENPKRISGLEFSALSAADIVAQSEIEVSSRDLFDLEKGREPKIGGALDRKMGV
SSSSLECETCHGNLASCHGHFGHIKLALPVFHVGYFKATIQILQGVCKTCSAILLNDQDK
RQFLTELRRPGVDNLRRMGILKKVLDQCKKQRRCLQCGALNGVVKKAAAGAGPASLKIIH
DTFRWVGKKSAPEKDKWVGDWKEVLSHHPELERFMKRCSDDLNPLKTLNLFKQIKPEDCE
LLGIDSTVKSGRPETYIWRYLPAPPVCIRPSVMMQDSPASNEDDLTVKLTEIVWTSSLIK
AGLEKGISINNMMEHWDYLQLTVAMYINSDSVNPAMLPGASSGGGKVKPIRGFCQRLKGK
QGRFRGNLSGKRVDFSGRTVISPDPNLSIDEVAVPDRVAKVLTFPEKVTRYNKQKLQQLI
INGPNVHPGANYLLKKNEDARRNLRYGDRIKLAKNLQHGDVVERHLEDGDVVLFNRQPSL
HRLSILSHFAKIRPWRTFRLNECVCTPYNADFDGDEMNLHVPQTEEARAEAINLMGVKNN
LLTPKSGEPIIAATQDFITGSYLISHKDSFFDRATLTQLLSMMSNGTLRFDIPPPAIMKP
YYMWTGKQVFSLLIRPNKESPVVINLDAKNKVFMPPKYKDYPNEMSRNDGYVVIRGSNIL
SGVMDKSVLGDGKKHSVFYTILRDYGPQEAANAMNRMSKLCARYLGNRGFSIGISDVTPA
DDLKQKKEELVEIAYAKCDELIDQFHKGKLETQPGCNEEQTLEAKIGGLLSKVREEVGDV
CINELDNLNAPLIMATCGSKGSTLNVSQMVAVVGQQIISGNRVPDGFQDRSLPHFQKNSK
TPQSKGFVRNSFFSGLTPPEFLFHAISGREGLVDTAVKTAETGYMSRRLMKSLEDLSCQY
DNTVRTSSNGIVQFTYGGDGLDPMEMEGNAKPVNFNRSWDHAINITFSNLEKGLLPYEIM
EKTNEILKPLEERLIRYDNVGELVPKKDNEKAEYVDQFDAERDFYRSLRDYIQEKADILA
RVRKSRGMLEMSSEPGEELRKLDPDERITESIKHSVDQLYKITEKSVQTFLEIALYKYRK
ARVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKVISTPI
INAVLVNENDERAARVVKGRIEKTLLSDIAYYIQDVYKDNLSFIQVRVDLGTIEKLQLEL
TIEDIAVAITKAPKLKIQTSDVNILGKDKIAINVYPDGYKAKSISTMAKEPSNNAVFYRM
QHLRRVLPSIVVKGFGDISRAVINIRDDGKRELLVEGYGLRDVMCTDGVIGMKTTTNHIL
EVNNVLGIEAARSSIIGEIDYTMSNHGMSVDPRHIQLLGDVMTYKGEILGITRFGLSKMR
DSVLQLASFEKTTDHLFDAAFYMKKDAVEGVSECIILGQTMSIGTGSFKVVKGTNISEAD
LKPKPTLFEKLSNCGTHKLN
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagttgtggttagtgagaatcctaaaaggattagtgggttagaattcagtgcc
ctcagtgcagctgatattgtagcccaatccgaaattgaggtttcctctcgtgatttattc
gacttagagaagggtcgtgaaccaaaaattggtggtgcattggatagaaagatgggtgtt
tcttcttcaagtctggaatgtgaaacttgtcatgggaatctagcgtcgtgtcatgggcat
tttggtcatattaagttggcattacctgttttccatgttggatatttcaaggcaacaatt
caaatcttacaaggtgtttgtaagacctgttccgccattttattgaatgatcaagataag
agacaatttttaacagagttgcgtcgtccaggtgtcgataacttaagaagaatgggcatc
ttgaagaaggttttagatcaatgtaaaaagcaaagaagatgtttacaatgtggagcatta
aatggtgttgttaagaaggcagctgcaggtgctggtccagcctctttaaagattattcat
gatacattccgttgggtaggaaagaaatctgcgccagagaaggataaatgggttggtgac
tggaaagaggttttatcgcatcatcctgaactagaaagattcatgaaaagatgttcagat
gacttaaatcctttgaagacattaaaccttttcaaacaaattaaacctgaagactgtgaa
ttattaggtatagattctaccgtgaaatctggtagaccagaaacatatatttggagatac
ttaccagcacctcctgtttgtattagaccttctgtgatgatgcaggactctccagcttca
aacgaagatgatttgacagttaaactaactgaaattgtttggacttcatccttgattaaa
gccggtctggaaaaagggatatctattaataatatgatggagcattgggattatttacaa
ttaactgttgcaatgtacatcaattcagactcggttaatccagcaatgttgcctggtgct
tccagtggtggtgggaaagttaaacctatccgtgggttctgtcaacgtttgaagggtaag
caaggtagattcagaggtaatctatctggtaagcgtgtagatttctctggtagaacagtt
atttctcctgatccaaatttatcaatcgatgaggttgccgtccccgatcgtgttgcgaag
gtcttgacatttccagaaaaggtgactcgttataataaacaaaaattgcaacaattaatt
attaatggtccaaacgttcatccaggtgccaactatttattaaagaaaaacgaggatgcc
agaagaaacttacgttatggtgatcgtattaaattagccaaaaatctacaacatggagat
gttgtggagagacatttggaagatggtgatgttgtcttattcaatcgtcagccatcattg
catagattatctatcttatcacattttgctaaaattcgtccctggagaactttcaggtta
aatgaatgtgtctgtacaccatataatgcagattttgatggtgatgaaatgaatctacac
gttcctcaaacagaggaggcacgagcagaagcaatcaatttaatgggtgttaagaataat
ttattgacgcctaagtctggtgaacccattattgctgctacccaagatttcattaccggc
tcttatttaatttcacataaggactcattttttgatagagcgaccttaactcagttatta
tctatgatgtctaatggtactttacgttttgatatacctcctcctgcaattatgaaaccc
tattatatgtggactggtaagcaggtgttctccctgcttattagaccaaataaggaatct
cctgttgtcatcaatttagatgccaaaaataaagttttcatgcctccaaaatacaaggat
tatccaaatgagatgtcaagaaatgatgggtatgttgtaattagaggttcaaatatttta
agtggtgtcatggataagtctgtcttaggtgatggtaagaagcattccgtattttataca
atattaagagattacggccctcaagaagctgccaatgctatgaatagaatgtccaaactt
tgtgcaagatatttaggtaatcgtggtttctcaattggtattagtgatgttactccagct
gatgatttgaaacagaagaaggaagaattagtcgaaatcgcttatgctaagtgtgatgag
ttgattgaccagttccacaaaggtaagttggaaactcaaccaggttgtaatgaggaacaa
actttagaagctaagatcggtggtctattatcaaaagttagagaagaagttggtgatgtt
tgtattaacgaattagacaaccttaatgctcccttgattatggcaacatgtggttctaaa
ggttctacactaaatgtttctcaaatggtggcagttgtcggacaacagattatttcaggt
aatcgtgttcctgatgggtttcaagatcgttcgttgcctcacttccagaagaattcgaaa
acgccacaatccaagggttttgttagaaactctttcttttcgggtctgactcctccagaa
tttttgttccatgccatttcaggtcgtgaaggtctagtcgatacagctgttaaaactgcc
gagactgggtatatgtctcgtagattgatgaagtcattggaagatctttcttgtcagtat
gataatactgtgagaacctcgtcgaatggtattgttcaattcacatacggtggtgatggt
ttggatcctatggaaatggaaggaaatgcaaagcctgttaactttaacagatcttgggat
catgccatcaatatcacatttagtaatctggagaagggactactaccttatgaaattatg
gaaaagactaacgaaattttaaagcctttagaggagagattgattagatatgataacgtt
ggtgaactggtaccaaagaaagataacgaaaaggctgaatatgttgaccagtttgatgct
gaaagagatttctaccgctctctaagggactacattcaagaaaaggcagacatactggca
cgtgtaagaaaatcaagaggcatgttagaaatgtcgagtgaaccaggtgaagaattaaga
aaattagatccagatgagagaattactgaaagcatcaaacactctgtcgaccaactttat
aagattactgaaaagagtgtccaaacatttttggaaattgctttgtataagtaccgaaag
gcaagagtggagccgggaacagctgttggtgctattggtgcacaatctattggtgaacct
ggtacccaaatgaccttgaaaactttccattttgctggtgttgcttctatgaacgttaca
ttaggtgttcctcgtattaaggaaatcattaatgcatccaaggttatttctactccaatt
atcaatgctgtattagttaatgaaaatgacgaaagagctgcaagagtggttaaagggaga
attgagaagactttgttgtcagatattgcatactacatccaggatgtgtacaaggataat
ctatcatttattcaggtccgtgtagatttaggaactattgaaaagttgcaattagaattg
accattgaagatattgcggtggcaattactaaggcaccaaaattgaagattcagacatca
gatgttaatattctcggtaaagataagattgccattaatgtctacccagacggctataaa
gctaaatcaatttctacaatggctaaggaacccagtaacaatgcagtcttttatagaatg
caacatctacgtcgtgttctacctagtatcgttgttaaaggttttggtgatatctcaaga
gctgttattaatattagagatgatggtaagagggaattgttggtcgaaggttatggtttg
agggatgtcatgtgtacagacggtgtcatcggtatgaagacaactacaaatcatatatta
gaagtcaacaacgtgttaggtattgaggcagcaagatcaagtattattggtgaaatcgat
tatactatgagtaatcatggtatgagtgttgatcctcgtcatattcaattgttaggtgac
gtgatgacatataagggagaaatcctgggtattactagatttggtttgagtaagatgaga
gattccgtcctacaattggcttctttcgaaaagactacggatcatttattcgatgcagct
ttctatatgaagaaggatgctgttgaaggtgtctctgaatgtattattttaggtcaaacc
atgtccattggtactggttcatttaaggtggtcaagggaacaaacatctctgaggcagac
ttaaaaccaaaaccaacattgtttgagaaattatccaattgtggaactcataaattaaac
taa
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