Candidatus Nitrosomarinus catalina: NMSP_0440
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Entry
NMSP_0440 CDS
T04846
Symbol
rpoE1
Name
(GenBank) DNA-directed RNA polymerase subunit E'
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
nct
Candidatus Nitrosomarinus catalina
Pathway
nct03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nct00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NMSP_0440 (rpoE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nct03021
]
NMSP_0440 (rpoE1)
Enzymes [BR:
nct01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NMSP_0440 (rpoE1)
Transcription machinery [BR:
nct03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
NMSP_0440 (rpoE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
S1_2
BPL_C
Motif
Other DBs
NCBI-ProteinID:
ARS64063
UniProt:
A0A2Z2HJ10
LinkDB
All DBs
Position
complement(378241..378834)
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AA seq
197 aa
AA seq
DB search
MFSISTLVDVVRIPPSLFGTTLKKAAVNILKEKYESMINAELGYIIMILDAKVDEMGKMI
AGDGGTFHKVEFEALTFYPKLQEIVQGEIVDITDFGAFVRIGPTDALLHLSQVMDDYLKS
DVKMGLILANQSGRTLKVGSTLRARITAVSLGKAAAMGKIGITCRQPFLGADEWIEEEIK
KAGGSSEPAKEEKVEAS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
ttgttttctatatctaccctagttgatgtcgttaggatacctccaagcttatttggaact
acactcaaaaaggcagcagtcaacatcctcaaagaaaaatacgagagtatgattaatgca
gaattaggctacatcattatgattttagatgctaaagtagacgaaatgggaaaaatgatt
gcaggggatggaggaacattccacaaagttgaatttgaagctttaacattttatccaaaa
ttacaagaaattgttcaaggtgaaattgtggacattacagactttggagcatttgtaaga
attggtccaacagatgcattactacacttatcacaagttatggatgattatctaaagagt
gatgtaaagatgggattaattttagcaaatcaaagtggaagaaccttgaaagttggttca
acattacgtgcaagaattacagctgtttcattaggtaaagctgctgcaatgggtaaaatt
ggtattacttgtagacaaccattcttaggtgcagatgaatggatcgaagaagaaattaaa
aaagctggaggttcaagtgaacctgcaaaagaagagaaagtagaggctagttaa
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