Candidatus Nitrosocaldus cavascurensis: NCAV_1172
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Entry
NCAV_1172 CDS
T05329
Name
(GenBank) putative threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncv03016
]
NCAV_1172
Enzymes [BR:
ncv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
NCAV_1172
Transfer RNA biogenesis [BR:
ncv03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
NCAV_1172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
SPC34339
UniProt:
A0A2K5ARV3
LinkDB
All DBs
Position
NCAV:complement(1018798..1020162)
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AA seq
454 aa
AA seq
DB search
MIGANVMVKVWLEVYGCSSSLSDGEIIAGIIAGKGYELASNFDEADASIIVTCVVKDATA
NRMVERIKRLSSKPLVVAGCMAKAEPNRIRRFSPRASIVGPNAIDRVDTALASALDGKGI
ILLDGSVQKVGLPKIRVNPVISMVQIGSGCLSECTFCETRIAKGRLTSYRIGDIVRQVRE
DVEQGCREVWLTSTDNGAYGRDIGTNLAELIKAVCSIDAEFMIRVGMMNPQYLPSMLDDL
IEAYRDDKVFKFIHIPVQSGSDRVLRLMRRGHRASTFIDMVKRFRRELKLCTIATDIIVG
FPSESEEDFNASIDLLLEVEPDVVNVSKYSARPGTEASRMEQLSKQVINERSRVMHDVVS
RVCYSRNLAWKGWEGAVLVDELTDTGGVQGRNFAYKPIYLIKKGIVDNNYDSYSKGHNSF
NNDGVNNAMRLLGSWVRVRIDRVTTHSLLGSIID
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgataggtgctaatgttatggtcaaggtctggcttgaggtgtatggttgctcatccagc
ctatctgatggagagattatagcaggtataatagcaggcaaggggtacgaacttgcaagc
aactttgatgaggcagatgcaagcataatagtaacatgtgttgtgaaggatgcaacagca
aataggatggttgagaggataaagcgattatcaagcaaaccattggttgttgctggatgc
atggcaaaggcagagccaaataggataaggaggttcagccctagagcaagcatagttgga
ccaaatgctatagatagggttgatactgcattagcatctgcacttgatggtaaaggaatc
atcttgcttgatggctcagtgcagaaggtaggattgccaaagattagagtgaacccagtg
ataagtatggtgcagataggctctggatgcttgagtgagtgcacattctgcgagacaagg
atagcaaagggtaggctcacaagttacaggataggcgatatagtaaggcaggttagggag
gatgtagagcaagggtgtagagaggtatggttaacctcaacagataatggtgcatatggt
agggatataggaacaaaccttgctgagcttataaaggctgtatgctcaatagatgctgag
ttcatgataagagtagggatgatgaaccctcaatacctaccctcaatgcttgatgatctc
atagaggcatatagggatgataaggtattcaagttcatccacatccctgtgcagagcggg
agtgatagagtgcttagacttatgcgtagggggcatagggcatcaacattcatagatatg
gtgaagaggttcaggagggagttgaaactatgcactatagcaacagatattatagtaggc
ttccctagcgagagtgaggaggactttaatgctagcatagatctcttgctagaggttgag
ccagatgttgttaatgtatcaaagtacagtgctagaccagggacagaggcaagcaggatg
gagcaacttagcaaacaggttataaatgagaggagtagggtgatgcatgatgttgttagc
agggtatgctactcaaggaacctagcatggaagggctgggagggtgcagtattggtggat
gagttgactgatactggaggagtacagggtagaaactttgcttacaaaccaatctatcta
attaagaaggggatagtagataataattatgatagttacagcaaggggcataattctttc
aataacgatggtgtgaataatgcaatgagattgctaggatcatgggtaagggttaggata
gatagggttacaacacactctctcctagggagcatcatagactaa
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