Candidatus Nitrosocaldus cavascurensis: NCAV_1441
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Entry
NCAV_1441 CDS
T05329
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Pathway
ncv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NCAV_1441 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ncv01007
]
NCAV_1441 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncv03016
]
NCAV_1441 (lysS)
Enzymes [BR:
ncv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
NCAV_1441 (lysS)
Amino acid related enzymes [BR:
ncv01007
]
Aminoacyl-tRNA synthetase
Class I (A)
NCAV_1441 (lysS)
Transfer RNA biogenesis [BR:
ncv03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NCAV_1441 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1
Anticodon_2
DUF3039
Motif
Other DBs
NCBI-ProteinID:
SPC34607
UniProt:
A0A2K5ASJ8
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All DBs
Position
NCAV:1267531..1269177
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AA seq
548 aa
AA seq
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MQRVIGKGTWLDKVAHLLVERERRLGRDLSLIRVESGLGASGIPHIGSLGDAVRAYGVKL
ALENLGYKGELIAYSDDMDGLRKIPHGLPEWLKEYIAMPVCNIPDPFTCHSSYAMHMSSM
LMDALDRLSIQYRFQSGYEAYKQGLLNKEIDILLRNAKVIGERIAELVGQEKFKQILPYF
PICSNCKRIYLAQAYEYVEDEHKVLYECKGGIIGREYVQGCGYKGEADVFKAEGKLSWKV
EFAARWSALNIRFEAYGKDIMDSVKVNDWVADNILNYAHPLHVRYEMFLDKSGRKISKSA
GNVFTPQLWLRYGTAESLMLLLFKRIAGTRHVGVEDIPRLEDEYDRLEDTYFNSSRIDIS
SSLSSASTTTADTMKLIKQRGIYEYINHNKPPSRAGEHVPYMLLAQLAAVAVEGKEVEYV
LNRLRAYGMLKGSDGISERLRERILKARLYAIEVLQQRPESKAVSLDERQRKAIEDLIQV
IGSSDDAKVIQSSIFDTARRHGIEPKEFFRLLYMLLIGTDYGPRLGPYIIDVGRDNVINI
LKRHLASV
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagagtaataggcaagggtacatggctagataaggttgcccacctcctagtagag
agggagaggaggcttggtagggatctatcgttaataagggttgaatctggattgggagca
tctggaataccacatataggtagccttggcgatgctgttagagcatatggtgttaaactt
gcactagagaatctaggctacaagggggagttgatagcatatagcgatgatatggatggg
cttaggaagattccacatgggcttccagagtggctcaaggagtatatagcgatgccagta
tgcaatataccagacccattcacatgtcattcatcctatgcaatgcacatgtcaagtatg
ctcatggatgcactggataggttaagcatacaatataggttccagagtgggtatgaggcg
tataagcaagggttactaaacaaggagatagatatactgctaaggaatgccaaggttata
ggagagaggattgctgaacttgttggacaggagaagttcaagcagatactaccatacttt
cctatatgctcaaactgcaagaggatataccttgcccaagcatatgagtatgttgaggat
gagcataaggtactttatgagtgtaaaggaggcataataggtagagagtatgtacagggc
tgtggttacaagggagaggctgatgtattcaaggctgagggtaagttaagttggaaggtt
gagtttgctgcaaggtggagtgctcttaacataaggtttgaggcgtatggcaaggatata
atggatagtgtcaaggttaatgactgggttgcagataacatactgaactatgcccatccc
cttcatgttaggtatgagatgttccttgacaagagtgggaggaagataagtaagagtgct
ggaaatgtatttacacctcagttatggcttagatatggtactgcagaatctctcatgcta
ctgctcttcaagaggatagcaggtacaaggcatgttggtgttgaggatataccaaggctt
gaggatgagtatgatagacttgaggatacatacttcaatagtagtaggatagatatttct
tcttccctatcttctgcttctactactactgctgatacaatgaagttgatcaagcagaga
ggcatatatgagtacataaaccacaacaagccaccaagcagagcaggggagcatgtacca
tacatgctgcttgcacagttggcagcagtagcagttgaggggaaggaggttgaatacgta
ctcaacagacttagggcatatgggatgctgaagggaagcgatgggatctctgagaggttg
agggagaggatactcaaggcaaggctttatgcgattgaggtgttacagcagagacctgag
tccaaggcagtatctctagatgagaggcagaggaaggctatagaggatcttatacaggta
ataggcagtagtgatgatgcaaaggttatacagtcaagcatatttgatactgcaaggagg
catggaatagagcctaaggagttcttcaggttactgtatatgctgcttataggcactgac
tatggaccaaggcttgggccatacataatcgatgttgggagggataatgtaataaacata
ctcaagaggcatcttgctagtgtatga
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