Candidatus Nitrosocaldus cavascurensis: NCAV_1448
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Entry
NCAV_1448 CDS
T05329
Symbol
pdxS
Name
(GenBank) Pyridoxal 5'-phosphate synthase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
ncv
Candidatus Nitrosocaldus cavascurensis
Pathway
ncv00750
Vitamin B6 metabolism
ncv01100
Metabolic pathways
ncv01240
Biosynthesis of cofactors
Module
ncv_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
ncv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
NCAV_1448 (pdxS)
Enzymes [BR:
ncv01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
NCAV_1448 (pdxS)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NMO
IGPS
FMN_dh
NanE
Peptidase_S66C
TetR_C_27
Motif
Other DBs
NCBI-ProteinID:
SPC34614
UniProt:
A0A2K5ASN0
LinkDB
All DBs
Position
NCAV:1273474..1274463
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AA seq
329 aa
AA seq
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MMNTSRSNISLVSTELNARGIKMDRIDALPVTKGTTLVKRGFAHMQKHGVIMDVTNVEQA
QIAEDAGAVAVMVLDKLPYDVRKAGGVARTASIKVIEEIRDHVTIPIMAKCRIGHTEEAR
VLETVGVDMIDESEVLTPADEERHIWKWDFTTPFVNGARNLGEALRRIEEGASMIRTKGE
PGTGNVAEAIKHIRIVNSEIRRIRAIYEDGDVQELIRTARELRVSYAYVLETARLGRLPV
VNFAAGGITTPADAAMLMSLGCDGVFVGSGIFKSQDPMERARAIVIATSYWDDPKVVMEA
QRMIDEGKSMLGMDVKTLELRMQERGSEA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacacaagtagaagcaatatatcactggtctcaacagagttgaatgctagaggc
ataaagatggatagaatagatgctctgccggtaacaaagggcacaacgttagtaaagcgt
gggtttgcacatatgcagaagcatggggttataatggatgttacaaatgttgagcaggca
cagatcgctgaggatgctggtgctgttgcagtaatggtgcttgataaacttccctatgat
gttaggaaggctggaggagttgctagaactgcaagcataaaggtgatagaggagataagg
gaccatgtaaccataccaataatggccaaatgcaggatagggcatactgaggaggcaaga
gtgcttgagactgttggtgttgatatgatagatgagtctgaagtcttaacaccagcagat
gaggagaggcacatatggaagtgggatttcactacaccgttcgttaatggtgcaaggaac
cttggagaagcattgaggaggatagaggagggggcatctatgataagaaccaagggagag
cctggtacagggaacgttgcagaagcgattaagcatataaggatagtgaatagcgagata
aggaggataagggcaatatatgaggatggagatgtgcaggaacttataaggacagcaaga
gaactaagggtatcatatgcatacgtgctagagaccgcaaggcttggaagattgcctgtg
gttaactttgctgctggaggaataacaaccccagcagatgctgctatgctcatgagtcta
gggtgtgatggtgtctttgtaggctctggcatattcaagagccaagatcccatggagagg
gctagagcaatagtaatagcaacatcatattgggatgatccaaaggttgtaatggaggct
cagaggatgatagatgaaggcaagtctatgcttggtatggatgttaagaccctagagttg
aggatgcaggagaggggtagcgaggcatga
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