Nitrospira defluvii: NIDE0302
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Entry
NIDE0302 CDS
T01281
Symbol
yliG
Name
(GenBank) putative tRNA modifying enzyme, MiaB-like
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nde
Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nde03009
]
NIDE0302 (yliG)
Enzymes [BR:
nde01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NIDE0302 (yliG)
Ribosome biogenesis [BR:
nde03009
]
Prokaryotic type
ribosomal protein modification factors
NIDE0302 (yliG)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
CBK40082
UniProt:
D8PA23
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All DBs
Position
265928..267382
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AA seq
484 aa
AA seq
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MASSLITPSRAKRDKPTIGFVNLGCSKNQVDSEVMLGTLVAGGFQLTGDARAAEVVIINT
CGFIEEAKQESINSIIEHGRLKKSGSCRVLIAAGCLAQRYQGELLKELPELDGVVGTGEF
GRIAEICRSLLAPKARQQRLWIGQPPYLYDAETPRIRLGTPHSAYLKIAEGCNRNCAFCA
IPIMRGKQRSRPIESIVAEAGRLVQEGVKELNLISQDTINYGVDLGLKQGLTALLRELVT
VKDVRWIRPFYLYPQQVTDELLDLYAGEARITKYLDMPLQHISDGMLKRMHRLGDRKHVT
QLVERIRAKIPGVFFRTAFIVGFPGETDAMFEELKQFILDMEFDRVAVFLYSDEEGTSAV
DLDRKVDLAVMEERRNELLALQESISEAKNRAYLGRTMEVLVDGISEESDRLLECRHEGL
APEIDGVVFCDRNAAKPGEFVSVTITDVAGYDLIAQPVSRADAPTAAPAVPTLLMPKKSG
AGYR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgtcattgattaccccgtcacgcgcgaaacgcgacaaacccacgatcggtttt
gtgaacctcggttgttcaaagaaccaggtggactcagaagtcatgctcggtacattggtc
gccggaggcttccaactcacgggcgacgcgcgcgccgcggaagtcgttatcatcaatacc
tgcggctttatcgaggaagccaagcaggaatcgatcaacagcatcatcgaacatgggcgg
ttgaagaagtccggatcctgccgcgtcctgattgccgcgggatgcctggcccagcggtac
cagggcgaactgttgaaagagttgcctgagttggacggcgtcgtgggaacgggcgagttc
gggcgcattgcggagatctgccgcagtttgctggcgccgaaagctcgtcagcagcgactc
tggatcggacaaccgccctatctgtacgatgccgagactccacgcattcgcctcggaact
ccccacagcgcctacctgaaaattgccgaaggctgtaaccggaactgcgcgttctgtgcg
attcccatcatgcggggcaagcagcgcagccgcccgattgagtcgattgtggctgaggcc
ggacggttggttcaggaaggggtgaaggaactcaacctgatttcgcaggacacgatcaac
tacggggtggaccttggattgaagcaggggctcacggcgttgcttcgggaactggtaacg
gtgaaggatgtgcgctggatccggcccttctatctatacccgcaacaggtgacggatgag
ttgctggatctgtatgccggagaggcgcgtatcaccaagtatctcgacatgccgttgcag
catatcagcgacggcatgctgaagcggatgcaccgattgggagaccgcaaacacgtcact
cagctggttgaacgtatccgcgccaagattcccggcgtctttttcaggacggcgtttatc
gtcgggtttcccggtgagaccgatgccatgttcgaggaactgaagcaattcatcctcgat
atggaattcgatcgcgtggcggtgtttctctattctgatgaagaaggcacatcggccgtc
gatctcgaccggaaagtcgacctggcggtaatggaagagcggcgcaacgagctgctggct
ctgcaggagtccatctcagaagccaagaatcgtgcctatctcggccgcacgatggaggtc
cttgtggatgggatctcagaagaatctgaccggctgcttgaatgcaggcacgaagggttg
gcgcctgagattgacggggtggttttctgtgatcgcaacgcggcgaagccgggtgagttt
gtttcggtcaccatcaccgatgtggccggatatgatctcattgcccagccggttagccgg
gccgacgcgccgactgctgcgcccgctgttccgactctcctcatgcccaaaaaatccggg
gcaggctaccgataa
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