Nitrospira defluvii: NIDE3663
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Entry
NIDE3663 CDS
T01281
Symbol
tetA
Name
(GenBank) Tetracycline efflux transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
nde
Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nde02000
]
NIDE3663 (tetA)
01504 Antimicrobial resistance genes [BR:
nde01504
]
NIDE3663 (tetA)
Transporters [BR:
nde02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
NIDE3663 (tetA)
Antimicrobial resistance genes [BR:
nde01504
]
Gene variants
Tetracycline resistance genes
Transporters
NIDE3663 (tetA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
MFS_1_like
Sugar_tr
TRI12
MFS_4
OATP
LacY_symp
Motif
Other DBs
NCBI-ProteinID:
CBK43341
UniProt:
D8P7J5
LinkDB
All DBs
Position
complement(3654415..3655653)
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AA seq
412 aa
AA seq
DB search
MAHPMTYVQRSTQPRQAAVFFILVTVVLDMLSFGIIIPVLPKLVEEFLGGDTAQAAEIYG
LMGTSWALMQFVCSPIQGALSDRFGRRPVVLLSNLGLGLDFILMALAPSLAWLFAGRVIS
GIASSSFSTAGAYIADVTPPDKRAAAFGMMGASFGLGFVLGPAVGGLLGAIDPRWPFWGA
AATSLLNACYGFFVLPESLPLEKRAPFRWKRANPAGALILLRSHHELFGLATANFLMNLA
HGVLPSVAVLYLGYRYGWGPSAVGFTLAAVGVCAMIVQGTLVRPITARLGERRTLITGLL
CGATGFAIYGLAPTPLIYCLGIPVMAFWGLAGPSAQMFMTRRVSASEQGQLQGAIASLTG
IAGLIGPTLFTQTFAAFIGPQADWHLPGAPYLLSTMLLLIGAGIAWRATRAV
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcccatcccatgacgtacgtgcagcgctccacacaaccgcggcaagcggcggtcttc
tttatccttgtcaccgtcgtgctcgacatgttgtcgttcgggatcatcattcccgtcctg
ccgaaactagtcgaagagtttctgggcggcgatactgcgcaggccgcggagatctacggg
ctgatgggcacgtcctgggccttgatgcagttcgtgtgctcgccgattcagggcgcgttg
tccgatcgcttcgggcggcgtccggtcgtgctcctctccaacctggggctcggtctcgat
ttcatcctcatggcgctggcgcccagtctcgcctggctctttgcgggccgggtcatctcc
ggtatcgcctcctcgagtttcagcacggccggcgcctacatcgccgatgtcacgccgccg
gacaaacgcgcggccgccttcggcatgatgggggcctcgttcggcctcgggtttgtgttg
gggcctgcggtgggtgggttgctgggcgccatcgatccacgctggcccttttggggcgcg
gcggcgaccagtctgctcaacgcctgttacgggttctttgtgctcccggaatcgctcccg
cttgagaagcgggccccgttccggtggaaacgggccaatccggccggagcgttgattctg
ttgcgttcgcatcatgagctgttcggcctggcgacggcgaacttcctgatgaacctcgcg
cacggggtgttgcccagcgtggcggtgttgtatctggggtaccggtatggctgggggccg
tcggcggtgggattcacgctcgcggcggtcggggtctgcgccatgattgtgcagggcacg
ctggtgaggccgatcacggcgcggctgggagagcggcgcacgttgatcaccgggctgctg
tgcggggccaccggattcgctatctatggcctcgcgcccacgccgctcatctattgccta
ggtattccggtgatggcgttttggggcctcgccggtccgtccgcgcaaatgttcatgaca
cgccgcgtgagtgcgtccgagcagggacaattacaaggcgccattgccagcctgaccggc
atcgccggcttgatcggccccacgctcttcacacagaccttcgccgcgttcatcggcccg
caggccgactggcacctgccgggggcgccctatctgttatccacgatgctgttgctgatc
ggggcgggcatcgcctggcgggcgaccagagccgtctga
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