Nitrospira defluvii: NIDE3853
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Entry
NIDE3853 CDS
T01281
Symbol
pdhB
Name
(GenBank) Pyruvate dehydrogenase E1 component, beta subunit (Transketolase)
KO
K00162
pyruvate dehydrogenase E1 component subunit beta [EC:
1.2.4.1
]
Organism
nde
Nitrospira defluvii
Pathway
nde00010
Glycolysis / Gluconeogenesis
nde00020
Citrate cycle (TCA cycle)
nde00620
Pyruvate metabolism
nde00785
Lipoic acid metabolism
nde01100
Metabolic pathways
nde01110
Biosynthesis of secondary metabolites
nde01120
Microbial metabolism in diverse environments
nde01200
Carbon metabolism
nde01210
2-Oxocarboxylic acid metabolism
Module
nde_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
NIDE3853 (pdhB)
00020 Citrate cycle (TCA cycle)
NIDE3853 (pdhB)
00620 Pyruvate metabolism
NIDE3853 (pdhB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NIDE3853 (pdhB)
Enzymes [BR:
nde01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
NIDE3853 (pdhB)
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Gene cluster
GFIT
Motif
Pfam:
Transket_pyr
Transketolase_C
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
CBK43526
UniProt:
D8PJF2
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All DBs
Position
3827543..3828517
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AA seq
324 aa
AA seq
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MTTITYREAVRSGLREALKRDPRVFLMGEDVGKYGGTYACSKGLLDEFGPERIRDTPLSE
STFVGAGIGAALGGMRPIVEVMTVNFSLLALDQILNNAATLRHMSGGQFNVPLVVRMATG
AGRQVAAQHSHSLEGWYAHIPGITVLTPATVTDAQGMLLAALQEPDPVFIFEHAYLYSME
GELEGSRPAVDISRAAVRRPGNDLSLITFGGSLWKALAAATQLAQEGIEAEVLDLRVLRP
LDTGTILTSVRKTHRAVVIDEAWRTGSFAAEIAAQIMEGAFYDLDAPVARVCSEEVPIPY
PKHLEEAALPQPDKIVKAVRRLLG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgatcacctacagagaagccgtgcggtctggattacgggaagcgctcaagcgc
gaccctcgcgtcttcctcatgggggaggatgtcgggaaatacggcggcacctatgcgtgc
agcaaagggttgctcgacgagttcggcccggaacgcattcgtgacacgccgctatcggaa
agcaccttcgtcggcgccggtatcggcgcggccctgggcggcatgcgtccgattgtggaa
gtgatgacggtgaatttcagcctgctggcactcgatcaaattctgaataacgcagcgacg
ctccggcacatgtccggcggtcagttcaacgttcccctggtcgttcgaatggccaccggc
gccggccgccaggtggccgcgcaacattcgcacagcctggaaggctggtatgcgcacatt
cccggcatcacggtcctgacgcctgccactgtgacagatgcgcagggcatgctgctcgcc
gcgctccaggagccggacccggtgtttatttttgagcatgcgtatctctattccatggaa
ggcgaattggagggaagccggcccgcagtcgatatctctcgcgctgcggtgcgccgaccc
ggaaacgacctgagcctcatcacattcgggggtagcctgtggaaggcgttggccgctgcc
acacaactggcacaagagggcatcgaggccgaagttctggatctgcgcgtcctacgcccc
ctcgataccggtaccatcctcacctccgttcgaaagacccaccgggcggtggttatcgac
gaggcctggcgcacgggaagtttcgccgccgaaatcgccgcgcagatcatggagggtgcg
ttttacgatttggatgccccggtcgcgcgggtctgcagcgaagaagttccgattccctat
ccgaaacatctggaagaggcggcgctgccgcagccggacaagatcgtgaaggcggttcgc
aggttgttgggataa
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