Naumovozyma dairenensis: NDAI_0A02130
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Entry
NDAI_0A02130 CDS
T02234
Symbol
NDAI0A02130
Name
(RefSeq) hypothetical protein
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
ndi
Naumovozyma dairenensis
Pathway
ndi03020
RNA polymerase
ndi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ndi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NDAI_0A02130 (NDAI0A02130)
09124 Replication and repair
03420 Nucleotide excision repair
NDAI_0A02130 (NDAI0A02130)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ndi03021
]
NDAI_0A02130 (NDAI0A02130)
03400 DNA repair and recombination proteins [BR:
ndi03400
]
NDAI_0A02130 (NDAI0A02130)
Enzymes [BR:
ndi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NDAI_0A02130 (NDAI0A02130)
Transcription machinery [BR:
ndi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
NDAI_0A02130 (NDAI0A02130)
DNA repair and recombination proteins [BR:
ndi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
NDAI_0A02130 (NDAI0A02130)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
11495551
NCBI-ProteinID:
XP_003667614
UniProt:
G0W3I3
LinkDB
All DBs
Position
1:complement(477808..482997)
Genome browser
AA seq
1729 aa
AA seq
DB search
MVGQQYSSAPLRTVKEVQFGLFSPEEVRAISVAKIRFPETMDETQTRAKIGGLNDPRLGS
IDRNLKCQTCQEGMNECPGHFGHIDLAKPVLHVGFIAKIKKVCESVCMHCGKLLLDEHNE
QMRQAIAIKDSKKRFNAVWNLCKTKMICDTDVPSDDDPTQLISRGGCGNAQPTVRKDGLK
LVGSWKKEKNTNDGDEPEQRVLSTEEILNIFKHISPEDSTRLGFNEEFARPEWMILNVLP
VPPPPVRPSISFNESQRGEDDLTFKLADILKANISLETLEHNGAPHHAIEEAESLLQFHV
ATYMDNDIAGQPQALQKSGRPVKSIRARLKGKEGRIRGNLMGKRVDFSARTVISGDPNLE
LDQVGVPKSIARTLTYPEVVTPYNIDRLTQLVRNGPNEHPGAKYVIRDNGDRIDLRYSKR
AGDIQLQYGWKVERHITDNDPVLFNRQPSLHKMSMMAHRVKVIPYSTFRLNLSVTSPYNA
DFDGDEMNLHVPQSEETRAELSQLCAVPLQIVSAQSNKPCMGIVQDTLCGIRKLTLRDTF
LEFDEVLNMLYWVPDWDGVIPTPAIIKPKPLWSGKQVLSIAIPRGIHLQRFDEGTTLLSP
KDNGMLVVDGQIIFGVVDKKTVGSSNGGLIHVVTREKGPTICAKLFGNIQKVVNFWLLHN
GFSTGIGDTIADGSTIKEITETIADAKRKVEDVTKEAQSNLLTAKHGMTLRESFEDNVVR
FLNEARDKAGRLAEMNLNDLNNVKQMVSAGSKGSFINIAQMSACVGQQSVEGKRIGYGFV
DRTLPHFSKDDYSPESKGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTAETGYIQRR
LVKALEDIMVHYDGTARNSLGNVIQFIYGEDGMDAAHIEKQSLDTIGGSDAAFEKRYRID
LMNPKNALDPSLLESGSEITGDVKLQSLLDEEYKQLIKDRKFLRKIFVDGESNWPLPVNI
RRIIQNAQQTFRIDHSKPSDLTIRDIIFGLKDLEERLLVLRGKSEIIQKAQDDAITLFCC
LVRSRLSTRRILQEYRLTKQAFEWVLNNVEAQFLRSVVHPGEMVGVLAAQSIGEPATQMT
LNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSLTVYLKDDYSSDQEKAKFIRSAIEH
TTLKSITVASEIYYDPDPRSTVIPEDDEIIQLHFSLLDDETEQSLDRQSPWLLRLELDRA
AMNDKDLTMGQVGERIKETFRNDLFVIWSEDNAEKLIIRCRVVRPKSMDAETEAEEDHML
KKIENTMLENITLRGVENIERVVMMKYDRKVPSQSGEYQKVPEWVLETDGVNLSEVMTVP
GVDATRIYTNSFIDITEVLGIEAGRAALYREVYNVIASDGSYVNYRHMALLVDVMTTQGA
LTSITRHGFNRASTGALMRSSFEETVEILFEAGASAELDDCRGVSENVLLGQMAPIGTGA
FDVMIDEESLVKYMPEQKIMELEGEEDGGATPYSNESGLINTEIDVKDELMFSPLVDAGT
TDAMAGGFTAYGGADYGGATSPFGAYGDAPTSPGFGGVSSPGFSPTSPGYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPTYSPTSPSYSPTSPSYSPTSPSY
SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPTYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPGYSPTTGSYSPGSPTYSPKEGDDKNKKDEKENSS
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atggtcggacaacaatattcaagcgcaccactacgtacagtgaaagaagtccaatttggt
cttttctccccagaagaggttcgtgctatcagtgtagccaaaattagattcccagaaact
atggatgaaactcaaactagagcgaaaattggtgggttaaatgatccaagattaggttcc
atcgatcgtaatttgaaatgtcaaacatgtcaagaaggtatgaatgaatgtccaggtcat
tttggccatattgatttagcaaaaccggttttacatgttggtttcattgcaaaaattaaa
aaagtttgtgaatctgtctgtatgcattgtggtaaactattattagatgaacataacgaa
caaatgagacaagctattgctataaaagattctaagaagagatttaatgctgtatggaat
ttatgtaaaacaaaaatgatatgtgatactgatgtaccttctgacgatgatccaacccaa
ctgatatcaagaggtggttgtggtaatgctcaaccaactgttcgtaaggatggtttgaaa
ttagtaggaagttggaagaaagagaaaaatactaatgacggagatgaaccggaacaaaga
gttttaagtacagaagaaattttgaacatttttaaacatatttctccagaggattcaaca
agattaggtttcaacgaagaatttgcacgtccggaatggatgattctaaatgtcttacct
gttccaccaccaccagttcgtccatcaatttcatttaatgaatcccaaagaggtgaagat
gatttaacgtttaaattggctgatatcctgaaagcgaatattagtttggaaacattggaa
cataatggtgcaccacaccatgctattgaagaggcagaaagtttgttacaattccatgtt
gcaacatatatggataatgatattgcaggtcaacctcaggctcttcaaaaatctggtcgt
ccagtcaaatctattcgtgcacgtttaaagggtaaagaaggccgtattagaggtaactta
atgggtaagcgtgtggatttctctgcaagaactgttatttctggtgatccaaatctagaa
ttagaccaagttggtgtaccaaaatcgattgccagaactcttacatatccagaagttgtt
actccatataatattgatcgtctaacacaattggtgcgtaacggtccaaatgaacatcct
ggtgcaaaatatgttattcgtgacaacggtgatcgtattgatttaagatacagtaaaaga
gctggtgatatccagttacaatacgggtggaaagttgaacgtcatattacggataatgat
ccagttctattcaatcgtcaaccttctctgcataaaatgtctatgatggcccatagagtt
aaagttattccatattccacattcagattgaatttgtctgttacctctccttataatgcc
gatttcgatggtgatgaaatgaatttacacgttccacaatctgaagagacaagagctgaa
ttgtcacaattatgtgctgttccattacaaattgtttcagcacaatctaataaaccatgt
atgggtattgtgcaagatactttatgtggtattcgtaaattaacattgagggataccttc
cttgaatttgatgaagttctaaatatgctatattgggtcccagattgggatggtgtcatt
cctactccagccattataaaaccaaaaccgctatggtcaggtaaacaagtgctttctatc
gcgattcctagaggtattcatttacaacgttttgatgaaggtactactttgttatcacca
aaagataatggtatgcttgtagtcgacggccaaattatttttggggttgttgataagaaa
actgtggggtcatccaatggtgggttaattcatgtcgtcacaagagaaaagggtccaaca
atatgtgcaaaattatttggtaatattcaaaaagtggtcaatttttggctattgcataac
gggttttcaacagggattggtgatacaattgctgatggatcaactatcaaagaaattaca
gagaccatcgcggatgcaaagcgtaaagttgaagatgttacaaaagaggcacaatctaat
ttgttaacggcaaagcatggtatgacattacgtgaatctttcgaagataacgttgttcgt
ttccttaatgaagccagagataaagctggtcgtctggctgaaatgaacttgaatgacctg
aataatgtgaaacaaatggtaagtgccggttctaaaggttcgtttattaatattgcccaa
atgtctgcgtgtgttggtcaacagtctgttgaaggtaaacgtattgggtatggttttgtt
gatcgtacactacctcatttctcaaaggatgattactctccagaatcaaagggttttgtg
gaaaattcttacttaagagggttgacacctcaagaattcttctttcacgcaatgggtggt
cgtgaaggtcttattgatacagctgtgaagactgcagaaacaggttatattcaacgtcgt
ttagtgaaagctttagaagatattatggtccactacgatggtacggcaagaaattcactt
ggtaacgttatccaattcatttacggtgaagatggtatggacgctgcccacatcgaaaaa
caatcattagatacaatcggtggttccgatgctgcattcgaaaagaggtacagaattgat
ttaatgaatccaaaaaatgcgttagatccatcattactagaatctggttctgaaataaca
ggtgatgtcaaactacagtctttactagacgaagagtataaacaattaataaaagatcgt
aagtttttaagaaaaatttttgtagatggggaatcaaactggccattaccagttaatatc
agacgtatcatacagaatgcacaacagacttttagaatcgatcattcaaaaccatcagat
ctaacaatacgtgatatcatatttggcctaaaagacctggaagaacgtctattagtgtta
cgtggtaaaagtgaaattatccaaaaagctcaagatgatgcaattaccttattttgctgt
ctggtacgttcacgtttatctactcgtagaatattacaagaatatagattaactaaacaa
gctttcgaatgggtccttaataatgttgaggcacagttcctacgttcagttgttcatcct
ggtgaaatggtcggtgtgttagcagcgcaatctattggtgaaccagctacacaaatgaca
ttgaatactttccattttgccggtgtggcctctaaaaaagttacttctggtgttcctcgt
ttaaaggaaattctaaatgtcgcaaaaaacatgaagacaccttctttaactgtctactta
aaggatgattattcatcagaccaagaaaaggctaagtttattagatctgcaattgaacac
actacattgaaaagtatcacagttgcatcagaaatttactacgatcctgatccacgttcc
actgttattccagaggacgacgaaattattcaattacatttctctttattagatgacgaa
actgaacaatctctagatagacaatcgccatggttattacgtctagaacttgatcgtgca
gctatgaacgataaagatttgacaatgggccaagtgggtgaaagaatcaaagaaacgttc
agaaatgatcttttcgtcatctggtcagaagataatgcagaaaaattaatcattcgttgt
cgtgttgtccgtccgaaatccatggatgccgaaaccgaagcggaagaagatcatatgcta
aagaagattgaaaacaccatgcttgaaaatattacattgcgtggtgtggaaaatattgag
cgtgttgttatgatgaaatatgatcgtaaagttccaagtcaatctggtgagtatcagaaa
gtacccgaatgggtcttagagactgatggtgtcaatctatctgaagttatgacagtaccg
ggtgtggatgcaacaagaatatatacaaattcatttatcgatattactgaagtactgggt
attgaagcaggtcgtgcagccttatacagagaagtttacaatgttattgcctctgatggt
tcttacgttaactatcgtcatatggctttattggttgatgttatgacaacacaaggtgca
ttaacatctattactcgtcatgggttcaatagagcttcaaccggtgctttaatgagatcg
tcgttcgaagaaacggtcgaaatcttattcgaagccggtgcttctgcagaattagatgat
tgtcgtggtgtttcagaaaatgttttattaggacaaatggctccaattggtacaggtgcg
tttgatgttatgattgatgaagaatcattggttaagtacatgcctgaacagaagattatg
gaacttgaaggtgaagaagacggtggtgctactccttacagtaatgaatctggtctaata
aatacagaaatcgatgtgaaagacgaacttatgttttccccattggtcgatgcaggtaca
acagatgctatggccggcggatttactgcatatggtggtgcagactatggtggtgcgacc
tcaccttttggtgcatatggggacgctcctacctctcctggtttcggtggcgtatcttct
ccaggtttctcaccaacatcgcccggatattcgccaacgtcaccaagttatagtccaacc
tctccttcatattcaccaacctcaccatcatactccccaacttctccatcgtactctcca
acttcgccaagttacagtccgacatctccatcttactcaccaacctcaccaacttatagt
ccaacatcaccaagctacagtcctacatctccaagttacagcccaacatctccttcatat
tcgccaacctcaccaagttacagcccaacctcaccctcctactcacctacctcaccaagc
tatagtccaacatcaccttcatattctccaacatcgcctagttacagtcctacctctcca
acatatagtcctacttctccttcatactcacctacatccccttcatattccccaacttca
ccaagctatagtcctacttctccttcatactcaccaacatctccagggtattctccaacc
acaggtagctacagcccgggatctcctacatactctccaaaagagggagatgacaaaaat
aaaaaagatgagaaggaaaattcatcataa
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integrated database retrieval system