Nocardioides dokdonensis: I601_2898
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Entry
I601_2898 CDS
T04431
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ndk
Nocardioides dokdonensis
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ndk03009
]
I601_2898 (rimO)
Enzymes [BR:
ndk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
I601_2898 (rimO)
Ribosome biogenesis [BR:
ndk03009
]
Prokaryotic type
ribosomal protein modification factors
I601_2898 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ANH39314
UniProt:
A0A1A9GM12
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All DBs
Position
3039120..3040601
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AA seq
493 aa
AA seq
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MTTQTPTPDQSTAPDLLSVAMVTLGCARNEVDSEELAGRLEAGGFRLVEDASEADTVVVN
TCGFVEAAKKDSVDTLLQAADLKVEHGGRAQAVVAVGCLAERYGKDLAESLPEADAVLGF
DDYPDIAARLRSIVAGETHQAHTPQDRRRLLPISPVDRADTELAVPGHGDVTTVGQGGPA
TGPRAVRRRLDSGPMAPLKLASGCDRRCSFCAIPAFRGSFVSRRPADVLTEARWLATQGV
RELFLVSENSTSYGKDLGDLRLLETLLPELSAIEGVDRVRVSYLQPAETRPGLIEAIATT
PGVVPYFDLSFQHASNAVLRRMRRFGDPESFLGLLEQVRSLAPEAGVRSNVIVGFPGESE
DDLQTLCDFLVAARMDVTGVFGYSDEDGTEAARLDGKLDEDEVRARTEHVTGLVEQLNAE
RAEERVGERVRVLVESLVDEDGAPMVAGRSAHQGPEVDGTTYLPASAGLRIGDLVDAVVT
DTEGVDLFAEESR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgactacccagacccccaccccggaccagtccaccgcccccgacctgttgtcggtggcg
atggtgaccctcggctgcgcgcgcaacgaggtggactccgaggagctcgcgggccgcctc
gaggccggcggcttccgcctggtcgaggacgcctccgaggccgacacggtcgtggtgaac
acctgcggcttcgtcgaggccgccaagaaggactcggtcgacaccctgctccaggcggcc
gacctcaaggtcgagcacggcggacgcgcccaggccgtcgtggccgtgggctgcctggcc
gagcgctacggcaaggacctcgccgagtcgctgcccgaggccgacgcggtcctcggcttc
gacgactaccccgacatcgcggcgcggctgcgctcgatcgtcgcgggggagacccaccag
gcccacacgccccaggaccgtcgccggctgttgccgatcagcccggtcgaccgcgccgac
accgagttggccgtgccgggccacggcgacgtcaccacggtcggccagggcgggcccgcc
accggcccccgcgccgtacgccgccgcctcgactccggaccgatggccccgctcaagctc
gcctcgggctgtgaccggcgctgctcgttctgtgccatccccgccttccgcggctcgttc
gtgtcgcgtcgccccgccgacgtgctcaccgaggcccgctggctggccacccagggcgtg
cgcgagctcttcctggtctccgagaactcgacctcctacggcaaggacctcggcgacctg
cgcctgctcgagaccctgctgcccgagctgagcgcgatcgagggcgtcgaccgggtgcgg
gtctcctacctgcagcccgccgagacgcgcccgggcctgatcgaggcgatcgccaccacc
cccggcgtggtgccctacttcgacctgtccttccagcacgccagtaacgcggtgctgcgc
cggatgcgccgcttcggcgacccggagagcttcctgggtctcctcgagcaggtccgctcc
ctcgcccccgaggcgggggtgcgctccaacgtcatcgtcgggttccccggtgagtccgag
gacgacctccagacgctgtgcgacttcctggtggcggcgcggatggacgtcaccggtgtc
ttcggctactccgacgaggacggcaccgaggcggcccgcctcgacggcaagcttgacgag
gacgaggtgcgggcccgcaccgagcacgtcaccggcctggtcgagcagctcaacgccgag
cgcgcggaggagcgcgtgggcgagcgggtgcgggtgctggtcgagagcctcgtggacgag
gacggcgccccgatggtcgccggccgctccgcccaccagggccccgaggtcgacggcacc
acctacctgccggcctcggccggtctgcggatcggggacctcgtcgacgccgtggtcacc
gacaccgagggcgtcgacctgttcgcggaggagagccgatga
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