Nocardioides daphniae: E2C04_02590
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Entry
E2C04_02590 CDS
T05939
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
ndp
Nocardioides daphniae
Pathway
ndp00190
Oxidative phosphorylation
ndp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ndp00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
E2C04_02590
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2C04_02590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ndp03019
]
E2C04_02590
Enzymes [BR:
ndp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
E2C04_02590
Messenger RNA biogenesis [BR:
ndp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E2C04_02590
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
QCC76371
UniProt:
A0A4P7U9V2
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All DBs
Position
complement(537508..539679)
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AA seq
723 aa
AA seq
DB search
MSLSIPQASESLDDGPVESDALMHPSETFDVDPPYVPNHSELAAVEAFEERFLDRELSWL
RFNQRVLELAEDPALPMLERARFLAIFTSNLDEFFMVRVAGLKRRIAAGVAVRAASGLRP
REVLDAILNEAGQLMRRQCEVFADLIPALQGEGIELVRWDQLDKEEQKFCKKFFKERVFP
VLTPLAVDPAHPFPYISGLSLNLAVIVRHPKNGTEHFARVKVPQTFTRFVSVGNQRFVPL
EDVIGEHLKRLFPGMEIVATHTFRVTRNEDLEVEEDDAENLLKALEKELLRRRFGPAVRL
EVEETMDSRMLDLLVSELGVSQAEVYRLPAPLDLRGLHAIADLPRDDLQYPTFVPTTHPQ
LAEVESSSPVDIFDAVRKHGNVLLHHPYDSFATSVQRFIEQAAADPHVLAIKQTLYRTSG
DSPIIDALIDAAEAGKQVLVIVEIKARFDEQANIRWARKLEQAGCHVVYGVVGLKTHCKL
SMVVREEPDGIRRYTHIGTGNYNPKTARLYEDLGLLTSDEAIGEDVAHLFNNLSGISRNA
SYEQLLVAPGTVRSGLVEQIHAEIDHHRAGRPAGIRLKANSVVDEAVIDALYLASQAGVR
VQLLVRGICALRPGVAGLSETIEVRSVLGRFLEHSRVYSFENGGERRVWIGSADVMHRNL
DRRVEVLVRLPDGAHLERVDDVLDMAFAPDADAWHLAPDGTWTRHQGTIHLQERLVERQR
RRR
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctctcgatcccgcaggccagtgagtccctcgacgacgggccggtcgagtccgat
gccctcatgcacccgtcggagaccttcgacgtcgacccgccctacgtgcccaaccactcc
gagctggccgcggtcgaggccttcgaggagcgcttcctcgaccgcgagctgagctggctg
cgcttcaaccagcgcgtcctcgagctcgccgaggaccctgccctcccgatgctggagcgc
gctcgcttcctggccatcttcacctccaacctcgacgagttcttcatggtccgggtcgcc
ggcctcaagcgccggatcgccgccggcgtggccgtgcgggcggcctccgggctccggccc
cgcgaggtgctggacgcgatcctcaacgaggccgggcagctgatgcgccggcagtgcgag
gtcttcgccgacctgatccccgccctgcagggcgagggcatcgagctggtgcgctgggac
cagctcgacaaggaggagcagaagttctgcaagaagttcttcaaggagcgcgtcttcccg
gtgctgacgccgctggccgtcgacccggcccaccccttcccctacatctcggggctctcg
ctcaacctggccgtcatcgtgcgccaccccaagaacggcacggagcacttcgcgcgggtg
aaggtgccccagacgttcacccggttcgtctccgtcggcaaccagcggttcgtgccgctg
gaggacgtgatcggcgagcacctcaagcgcctcttccccggcatggagatcgtcgccacc
cacaccttccgggtgacccgcaacgaggacctcgaggtcgaggaggacgacgccgagaac
ctcctcaaggcgctggagaaggagctgctgcggcgtcgcttcggcccggcggtgcggctc
gaggtcgaggagacgatggactcccggatgctcgacctgctggtctccgagctcggcgtc
tcccaggcggaggtctaccggctgccggccccgctcgacctgcgcggcctgcacgcgatc
gccgacctgccgcgtgacgacctgcagtacccgaccttcgtaccgaccacgcacccgcag
ctggccgaggtcgagtcctcctcccccgtcgacatcttcgacgcggtgcgcaagcacggc
aacgtcctgctgcaccacccctacgactcgttcgcgacctcggtgcagcgcttcatcgag
caggccgccgccgacccgcacgtgctggcgatcaagcagacgctctaccgcacctccggc
gactccccgatcatcgacgccctcatcgacgcggccgaggccggcaagcaggtgctggtg
atcgtcgagatcaaggcgcgcttcgacgagcaggccaacatccgctgggcccgcaagctc
gagcaggccggctgccacgtggtctacggggtcgtcgggctgaagacccactgcaagctg
tcgatggtggtgcgcgaggagccggacgggatccggcgctacacccacatcgggaccggc
aactacaaccccaagacggcccgcctctacgaggacctcgggctgctgaccagcgacgag
gcgatcggcgaggacgtcgcccacctcttcaacaacctctccggcatctcccgcaacgcc
agctacgagcagctgctggtcgcgccgggcacggtgcgctcggggctggtcgagcagatc
cacgccgagatcgaccaccaccgcgccgggcggccggccggcatccggctcaaggccaac
tcggtggtcgacgaggcggtcatcgacgcgctctacctggcctcgcaggccggcgtacgc
gtgcagctgctggtccgcggcatctgcgcgctgcgccccggcgtcgcggggctgtcggag
accatcgaggtgcgctcggtgctcggccgtttcctggagcacagccgggtctactccttc
gagaacggcggggagcgccgggtctggatcgggtcggccgacgtcatgcaccgcaacctc
gaccgccgcgtcgaggtgctcgtacgcctgcccgacggcgcccacctggagcgggtcgac
gacgtgctcgacatggccttcgcccccgacgccgacgcgtggcacctcgcgcccgacggc
acctggacgcggcaccaggggacgatccacctccaggagcggttggtggagcgccagcgc
cgacggaggtga
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