Novosphingobium decolorationis: HT578_08935
Help
Entry
HT578_08935 CDS
T07993
Name
(GenBank) protocatechuate 3,4-dioxygenase
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr00362
Benzoate degradation
ndr00624
Polycyclic aromatic hydrocarbon degradation
ndr00627
Aminobenzoate degradation
ndr01100
Metabolic pathways
ndr01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HT578_08935
00627 Aminobenzoate degradation
HT578_08935
00624 Polycyclic aromatic hydrocarbon degradation
HT578_08935
Enzymes [BR:
ndr01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
HT578_08935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
QVM83808
LinkDB
All DBs
Position
complement(1959149..1960012)
Genome browser
AA seq
287 aa
AA seq
DB search
MARISAGVATSHIPAIGATIDNGKTGEPYWAPVFAGYDWSKQWIAEEKPDVVIIVYNDHA
SAFDMRIIPTFAIGCADRYGICDEGWGPRPVPEVIGHADLAWHIAQSLILDEFDMTIINE
MDVDHGLTVPLSLMFGQPEAWPVKVIPIAVNVVTYPPPSGNRCWQLGEAIARAVASFPED
LNVQVWGTGGMSHQLQGPRAGLINAEWDNRFLDLMSTNDGETLRTIPHIEYLRETGSEGI
EMVMWLIMRGALGRMVKPLHRHYHVPASNTAVGHLILRPAESSSSEV
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcatttccgccggcgtcgcgacaagccatattcccgcgatcggcgccacgatc
gacaacggcaagacgggcgagccttattgggcgccggtatttgccggctatgactggtcg
aagcaatggatcgccgaagaaaagcccgacgtagtcatcattgtctacaatgaccatgcg
tcggctttcgacatgcggataatccccactttcgcgatcggctgcgccgatcgctacggt
atttgtgatgaaggctggggaccgcggccggtgccggaggtgatcgggcatgcagacctt
gcttggcacattgcgcaaagcctgatcctggacgagttcgacatgaccatcatcaacgag
atggacgtcgaccacggcttgaccgttccgctcagtctcatgttcggtcagcccgaggcc
tggccggtaaaggtcattccgattgccgtgaatgtggtcacatatccgccgccatcgggc
aaccggtgctggcaattgggcgaggcgatcgcgcgggcagtggcgagcttccccgaagat
ctcaacgtgcaggtctggggtacgggtggtatgagccaccagttgcaggggcctcgagcg
ggcctgatcaatgcggaatgggacaaccgcttcctcgatttgatgagcacaaatgacggg
gagacgcttcgtaccattccccatatcgaatatctgcgcgagacgggctccgaaggcatc
gaaatggtgatgtggctcatcatgcgcggggcgctgggccgcatggtcaagccattgcat
cggcactatcacgtcccggcgtccaataccgcggtcggacatctcatattgaggccggct
gagagttcgtcatcggaggtctag
DBGET
integrated database retrieval system
