Candidatus Nitrosotalea devanaterra: NDEV_1218
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Entry
NDEV_1218 CDS
T04889
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit E'
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
ndv
Candidatus Nitrosotalea devanaterra
Pathway
ndv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ndv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NDEV_1218 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ndv03021
]
NDEV_1218 (rpoE)
Enzymes [BR:
ndv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NDEV_1218 (rpoE)
Transcription machinery [BR:
ndv03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
NDEV_1218 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
S1_2
Motif
Other DBs
NCBI-ProteinID:
CUR51983
UniProt:
A0A128A3P0
LinkDB
All DBs
Position
1:1074655..1075275
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AA seq
206 aa
AA seq
DB search
MFSISTLTDVVRIPPKLFGESLKKAAITILREKYESMINPELGYVIMILETKVEKMGKVI
AGDGGTYHRVEFTALTFSPKLQEIVRGEIVEITDFGAFVRIGATDALLHLSQIMDDYLKS
DVKSGMILANQSGRTMKIGTTLRARITAVSIGKTAAMKVGITCRQPFLGADEWIEEEIKK
AKAPAAAATPDKAKKPEAEKGKKSDK
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgttttctatatcgacccttactgatgtagttagaataccgcctaaactatttggggaa
tctctcaaaaaggcagcaatcacaattcttcgagaaaaatatgagagtatgataaatcca
gaacttggctatgtcataatgatacttgaaaccaaggtagaaaaaatgggcaaagtaatt
gcaggggacggcggtacatatcatagagtagaatttacagcattaacattttcaccaaaa
ctccaggaaattgtccgtggagaaattgtcgagattacagactttggagcatttgtcaga
attggtgcaacagatgcattgttacacttgtcacagataatggacgactacctaaaaagc
gatgtcaagtctggtatgatcttggcaaaccagagtggaagaacaatgaagattggaaca
acacttcgtgcaagaattacagccgtatcaattggcaagacagcagcaatgaaagtcggc
attacatgcagacaaccattcttgggtgcagatgaatggattgaagaagaaatcaaaaaa
gcaaaagcaccagctgctgcagcaacaccagacaaggcaaagaaaccagaagccgagaaa
ggaaagaaatcagacaagtga
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