KEGG   Candidatus Nitrosotalea devanaterra: NDEV_1609
Entry
NDEV_1609         CDS       T04889                                 
Name
(GenBank) MiaB-like tRNA modifying enzyme
  KO
K15865  threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
Organism
ndv  Candidatus Nitrosotalea devanaterra
Brite
KEGG Orthology (KO) [BR:ndv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ndv03016]
    NDEV_1609
Enzymes [BR:ndv01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.5  tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
     NDEV_1609
Transfer RNA biogenesis [BR:ndv03016]
 Eukaryotic type
  tRNA modification factors
   Methylthiotransferase
    NDEV_1609
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM zf-PARP TRAM_2
Other DBs
NCBI-ProteinID: CUR52371
UniProt: A0A128A4V7
LinkDB
Position
1:1390051..1391319
AA seq 422 aa
MAKIWVEAYGCSASFADSEMISGLIVNGGHSLAENEKDSDLSVIVTCSVKDVTAHKMVHR
IKKLKSNPLVVAGCLPKAEQATVEKFSPNASLLGPNSLGKTLEVIRSTLDGVRKIELADT
DVSKIGLPKVRLNPAVGIVEIASGCMSECTFCQTKIVKGDLQSYRVGDIVRQVRHEIEDG
CAEVWLTSTDNGCYGFDIGSSLPELVHAVSEIEQNFMMRVGMMNPMYLPRIKGKLLESFG
NDKVFKFLHIPVQSGSDKVLKDMKRMHTSKIFYDVNSEFRKRFDRFTIATDIIVGFPTET
EEDFVKTIDLINETRPDVVNLSRYSARSGTKASQMDQIDVDTVKQRSKLVFDLAKKISQQ
RNEEWIGWKGEVLFDEVSDGITKGRNFAYKQVVIDDNVNLGQKVNIKIDGAAPNGLYGSI
VS
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggcaaagatctgggtagaggcatatggttgctctgcaagttttgcagactcggaaatg
atatcaggtcttattgtaaacggagggcatagtcttgcagaaaatgagaaagactctgat
cttagtgtgatagttacttgttctgtcaaagatgtaaccgcgcacaagatggttcatagg
ataaaaaaattaaaatcaaatccacttgttgttgcaggttgtcttcctaaagcagaacag
gcaactgtggaaaaatttagtccaaatgcaagtttgcttggaccaaattcacttggaaaa
actttggaggtcatacgttccacactagatggagtaagaaaaatagaacttgcagataca
gatgtaagcaaaattggactgccaaaagtcagactaaatccagcagtaggaattgttgag
attgcaagcggttgtatgagcgagtgtacgttttgccagacaaagatagtcaagggggat
ttgcagagctatcgagttggagatatcgtaagacaagtacgtcatgagattgaagatggt
tgtgcagaggtgtggctcacatcaactgacaatggctgctacggttttgacattggttct
agccttcctgaactagtacatgcggtatcagagatagagcagaatttcatgatgcgtgta
ggaatgatgaatcccatgtacctcccacgcatcaagggcaaacttttagagagttttgga
aacgacaaagtcttcaagtttctccacattccagtccagagcggtagcgataaggtccta
aaagacatgaaaagaatgcacacttcaaagatattctatgacgtaaactctgaatttagg
aagagatttgatagatttaccattgcaactgacatcatagtaggttttcctacagagact
gaagaggactttgtcaagactatagatttgataaatgagacaagaccagatgttgtgaat
ctttcaagatatagtgctaggtctggcaccaaggcttcccagatggatcagatcgatgtt
gatacagtcaagcagagaagcaagctagtctttgatcttgcaaaaaagatctcccagcaa
agaaatgaagagtggataggctggaaaggagaggtcttgtttgatgaagtatcagatggc
ataacaaagggaagaaactttgcatacaaacaagtagtcatagatgataatgttaatctt
ggacaaaaagtcaatatcaagatcgatggtgccgcaccgaatggtctgtatggtagcata
gtgagctaa

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