Nocardiopsis eucommiae: KGD82_19725
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Entry
KGD82_19725 CDS
T08767
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nec
Nocardiopsis eucommiae
Brite
KEGG Orthology (KO) [BR:
nec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nec03009
]
KGD82_19725 (rimO)
Enzymes [BR:
nec01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KGD82_19725 (rimO)
Ribosome biogenesis [BR:
nec03009
]
Prokaryotic type
ribosomal protein modification factors
KGD82_19725 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QVJ00740
UniProt:
A0A975QK18
LinkDB
All DBs
Position
complement(4255535..4256968)
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AA seq
477 aa
AA seq
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MSSRRTVSLVTLGCARNEVDSEELAGRLAAGGWDLVDDDTKADVTVVNTCGFIDAAKQDS
IETLLEAAEGGGKVIAAGCMAERYGSELAEALPEANVIGFDDYATITDRLDDVVAGRKLA
PHDPRDRRTLLPISPAERDASQVHVPGHAAFTDSEGAEGTELPYRAATPRRRLTGGPVAN
LKIASGCDRRCTFCAIPAFRGAYISRQPDEIVREAEWLASEGVREVFLVSENSTSYGKDL
GDVRALEKLLPRLAAVEGLERVRVSYLQPAEVRPGLVDVLTNTPGVVPYFDLSFQHASGP
LLRRMRRFGDRERFLELLETARKGAPEAGARSNFIVGFPGETEEEFQELVAFLSEARLDA
IGVFGYSDEDGTEALTHEGKVPEEVVQERVDTLNRLAEELMVQRAEERIGTEVTVLVETV
LEDGAYEGRSEHQAPEVDGSTILYGEGLAVGDLVRATVIQSMGADLVAEQDGEAADR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcgccgtactgtctcactcgtcaccctggggtgtgcgcgtaacgaggtcgac
tccgaagagctcgccggtcgccttgccgctggcggctgggacctcgtcgacgacgacacc
aaggccgacgtgaccgtcgtcaacacctgcgggttcatcgacgccgccaaacaggactcc
atcgagaccctgctggaggcggccgagggcggcggcaaggtcatcgccgccggctgcatg
gccgagcgctacggctccgagctggccgaggccctccccgaggccaacgtcatcgggttc
gacgactacgccaccatcaccgaccggctcgacgacgtcgtcgccggacgcaagctggcc
ccgcacgacccgcgcgaccgccgcaccctgctgccgatcagcccggccgagcgcgacgcc
tcccaggtccacgtgcccggacacgccgccttcaccgactccgagggcgctgagggcacc
gagcttccctaccgcgcggccaccccgcgccgtcgcctgaccggcggccccgtcgccaac
ctcaagatcgcctccggctgcgacagacggtgcaccttctgtgccatccccgccttccgg
ggcgcctacatctcccgccagcccgacgagatcgtccgcgaggccgagtggctggctagc
gagggcgtacgcgaggtcttcctcgtcagcgagaactccacgtcctacggcaaggacctg
ggcgacgtgcgcgcgctggagaagctgttgccgcgcctggccgctgtcgagggcctggag
cgggtccgggtcagctacctccagcccgccgaggtccgccccgggctggtggacgtgctc
accaacacccccggtgtggtgccctacttcgacctctccttccagcacgccagcggcccg
ctgctgcgccgcatgcgccgcttcggtgaccgcgagcgcttcctcgagctgctggagacc
gcccgcaagggcgctccggaggccggtgcgcgctccaacttcatcgtcggcttccccggc
gagacggaggaggagttccaggagctggtggccttcctcagcgaggcccgcctggacgcc
atcggtgtgttcggctactccgacgaggacggcaccgaggccctgacccacgagggcaag
gtgcccgaggaggtcgtccaggagcgcgtggacaccctcaaccgcctggccgaggagctc
atggtccagcgggccgaggagcggatcggcaccgaggtgaccgtcctggtggagaccgtc
ctggaggacggcgcctacgagggccgctccgagcaccaggcgcccgaggtcgacggcagc
accatcctgtacggcgagggtctggccgtcggtgacctcgtgcgcgccaccgtcatccag
tcgatgggggccgacctcgtcgctgagcaggacggggaagccgccgacagatga
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