KEGG   Candidatus Nitrososphaera evergladensis: NTE_02193
Entry
NTE_02193         CDS       T03224                                 
Name
(GenBank) DNA-directed RNA polymerase, subunit K/omega
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
nev  Candidatus Nitrososphaera evergladensis
Pathway
nev03020  RNA polymerase
nev03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nev00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NTE_02193
  09124 Replication and repair
   03420 Nucleotide excision repair
    NTE_02193
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nev03021]
    NTE_02193
   03400 DNA repair and recombination proteins [BR:nev03400]
    NTE_02193
Transcription machinery [BR:nev03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     NTE_02193
  RNA polymerase III system
   RNA polymerase III
     NTE_02193
  RNA polymerase I system
   RNA polymerase I
     NTE_02193
DNA repair and recombination proteins [BR:nev03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      NTE_02193
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AIF84247
UniProt: A0A075MU54
LinkDB
Position
complement(1797938..1798351)
AA seq 137 aa
MVIKRFTKKPAARKSAVSKTKGKKGAEEEVEETKKSNRPADEVVTYSEQEYELKEVPAQG
NKILIGLPWLTRFERARITGARALQLSLGAPPLIKPDGANTSIALAMLEVEKKALPISIR
RILPNGMYQDIPIDWMK
NT seq 414 nt   +upstreamnt  +downstreamnt
ttggtaatcaagcgctttacaaaaaaacctgccgcacgcaagtctgccgtgtccaagacc
aagggtaaaaagggcgcggaagaggaagtagaggagaccaagaagtcgaaccgcccagcc
gacgaggtggtgacttattcagagcaagagtacgagctgaaagaagtcccggcgcaagga
aacaagatcctcattggtctgccgtggctcacaaggtttgagcgcgcaaggataactgga
gcccgcgcgctgcagctgtcactgggtgcgccgcctctgataaagccagacggtgcaaac
acatccattgcgcttgcgatgcttgaagtcgagaaaaaggcgctcccaatatcgatacgc
cgcatcctgccaaacggcatgtaccaggacatacctatcgactggatgaaataa

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