Nocardia farcinica IFM 10152: NFA_41180
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Entry
NFA_41180 CDS
T00207
Symbol
gcpE
Name
(GenBank) putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
KO
K03526
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:
1.17.7.1
1.17.7.3
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00900
Terpenoid backbone biosynthesis
nfa01100
Metabolic pathways
nfa01110
Biosynthesis of secondary metabolites
Module
nfa_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
NFA_41180 (gcpE)
Enzymes [BR:
nfa01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.1 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
NFA_41180 (gcpE)
1.17.7.3 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
NFA_41180 (gcpE)
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Gene cluster
GFIT
Motif
Pfam:
GcpE
MR_MLE_C
zf-RING_7
DHquinase_I
Motif
Other DBs
NCBI-ProteinID:
BAD58967
NIH_Japan:
nfa41180
UniProt:
Q5YS74
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All DBs
Position
complement(4266999..4268156)
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AA seq
385 aa
AA seq
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MTSTIGLGMPTAPAAVLAPRRKTRQLMVGSVGVGSDHPVSVQSMTTTKTHDVNATLQQIA
QLTASGCDIVRVACPRQEDADALATIAKKSQIPVIADIHFQPRYIFAAIDAGCAAVRVNP
GNIKEFDGRVKEVAKAAGAAGIPIRIGVNAGSLDKRMLEKYGKATPEALVESALWEASLF
EEHGFGDIKISVKHNDPVIMVEAYRQLAAQCDYPLHLGVTEAGPAFQGTIKSAVAFGALL
SEGIGDTIRVSLSAPPVEEVKVGTQILQSLNLRPRKLEIVSCPSCGRAQVDVYTLANEVT
AGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGNGKGQIFVKGQVIKTVPEHQIVETL
IEEAMRIAEEMGEQAGSGEPVVTVS
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagcaccatcggattggggatgccgaccgctccggcggccgttctcgccccccgc
cgcaagacccgccagctgatggtgggctcggtcggcgtgggcagcgatcacccggtctcc
gtgcagtccatgaccaccacgaagacccacgacgtcaacgccacgctgcagcagatcgcg
cagctcaccgcgtccggctgtgacatcgtgcgggtggcgtgcccgcgtcaggaagacgcc
gacgcgctggcgacgatcgcgaagaagagccagatcccggtcatcgccgacatccacttc
cagccgcgctacatcttcgccgcgatcgatgccgggtgtgccgcggtgcgcgtgaatccc
ggcaacatcaaggaattcgacggccgggtgaaagaggtcgccaaggcggcgggcgccgcg
ggtattccgatccggatcggcgtgaacgccggatcgctggacaagcggatgctggagaag
tacggcaaggccaccccggaggcgctggtggaatcggcgctgtgggaggcgagcctgttc
gaggagcacggtttcggcgacatcaagatctcggtcaagcacaacgacccggtgatcatg
gtggaggcctaccggcagctggccgcgcagtgcgattacccgctgcacctgggcgtcacc
gaggcgggtccggcgttccagggcaccatcaagtcggcggtggccttcggcgcgctgctg
agcgagggcatcggtgacaccatccgggtctcgctgtcggcgccgccggtcgaagaggtc
aaggtcggcacgcagatcctgcagtcgctgaacctgcgcccgcgcaagctcgagatcgtg
tcctgtccgtcgtgcggccgtgcccaggtcgatgtctacaccctcgccaacgaggtgacc
gcggggctggagggcatggaggtgccgctgcgggtggccgtgatggggtgcgtggtgaac
ggcccgggcgaggcgcgtgaggccgatctgggcgtggcctccggcaacggcaagggccag
atcttcgtcaagggccaggtgatcaagaccgtgcccgagcaccagatcgtggagacgctg
atcgaagaggcgatgcggatcgccgaggagatgggcgagcaggccggctccggcgagccg
gtcgtcaccgtgagctga
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