Neodiprion fabricii: 124188176
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Entry
124188176 CDS
T08986
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
nfb
Neodiprion fabricii
Pathway
nfb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124188176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfb03021
]
124188176
Enzymes [BR:
nfb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124188176
Transcription machinery [BR:
nfb03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
124188176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF4600
Motif
Other DBs
NCBI-GeneID:
124188176
NCBI-ProteinID:
XP_046436657
LinkDB
All DBs
Position
1:complement(9195332..9202120)
Genome browser
AA seq
1385 aa
AA seq
DB search
MVKELYRETAVARKISHVTFGIDNRHNMERQAHIHVVSKNLYSQDSHRSPVPYGVLDRKM
GTCSNQDSCTTCGKTLNECIGHFGYIDLELPVFHVGYFRSVINILQTICKKCSHVMLKEI
EKKSYMLRVLNPNIGYLTRKALRKQILEKAKKNSTCPNCGDLNGTIKKAGLLKIVHEKYK
NKKTVDMAVKRRLAEYNNVLEENRELEGILQSGLLHVLNPIEVQGILERIPVSDVPLLLM
NPDCSLPKDLILTRIPVPPICIRPSVVSDVKAGTNEDNLTMKLSEIVFINDVIQKHRQSG
AKVQMYNEDWEFLQLHCALYVNSEMSGIPLNMQPKKSGRGLVQRLKGKQGRFRGNLSGKR
VDFSSRTVISPDPNLRIEQVGVPIYVAKILTYPERVNASNIELMRKLVQNGPDVHPGANF
VQQRSTEFKKFLRYGNRLKISQELKYGDIVERHLRDDDVVLFNRQPSLHKLSIMAHKAKV
LEHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEARAEALVLMGNKSNLVTPRNGELLIA
ATQDFITGGYLLTQKDTFLNKSQACQLASCLLAGDDASMNIDLPEPAIMKPVELWTGKQI
FSLILKPNKKCPIRANLKTKGRAYTSNEELCINDSFVIIRNSELLAGSMDKSTLGSGSKQ
NIFYVLLRDWGEDASTTAMWRLARVASYYLMNRGFSIGISDVTPGQGLLKAKHDLLTAGY
SKCTEYITQMESGRLICQPGCSEEESLEAMILKELSVIRDHAGKACLKELHPSNSPLVMA
LSGSKGSFINISQMIACVGQQAISGKRVPNGFEDRALPHFGRHSKVPAAKGFVENSFYSG
LTPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLVKSLEDLCLHYDMTVRNSVGDIVQIL
YGGDGLDPTYMEGKDCPVDYKRVLDHTRAKSPYRDEQPLDGTSVISATTELLKSEDYSCL
SDEFKQELETFLKSVAHKINRLRHNATSKSSAVQQLERLTVSQLVEFMHTCKEKYMRAKI
EPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINANSNISTPIITA
ALENDTDPEFARRVKGRIEKTTLGEVTEYIEEVYLPDDCFLLIKLDVDRIKLLKLEVDAN
SIRYSICTSKLRLNPKLVNVRGDSIITVNPNKQKLNINYALMQLKETVPNVVIKGLPSVA
RAVIHNDDSTGKTRYRLFVEGDNMREVMATPGVLGKKTTSNNTMEVFKTLGIEAARATIM
TEIKLVMENHGMSIDRRHPMLVADLMTSRGEVLGITRHGLSKMKESVLNLASFEKTADHL
FDAAYYGQKDTISGVSESIIVGIPVPVGTGIFKLLHKAEDSKPERRQLIFDDPQYHKKIT
KPTTS
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggttaaggaattgtacagggaaactgcggtggcccgcaaaatttcccatgtcacgttt
gggattgacaaccgtcataacatggagcggcaagcccatatccatgtcgtctccaaaaat
ctctacagtcaggacagccatcgttcgccagtgccttatggtgttctcgatagaaaaatg
ggaacatgctccaatcaggacagctgtaccacatgtggtaaaacattaaacgaatgtatc
gggcactttggatacattgatttggaactgccagtatttcatgtaggatattttagatct
gtgataaacatccttcaaacaatatgcaagaaatgttcacacgtgatgctgaaagagata
gagaaaaaaagttacatgttgcgtgtattgaatccaaatataggatacttgactcgtaaa
gcactgagaaaacaaatactggaaaaggcaaagaaaaattctacgtgtccaaattgtggg
gatttaaatggaacaattaaaaaagcagggttgttaaaaattgttcatgagaaatataag
aacaaaaaaacagttgatatggcggtgaaacgaagactggccgaatataacaatgtattg
gaagaaaacagagaactagaagggattcttcaaagtggactgcttcatgtcttgaacccc
attgaggttcaaggtatcctggagcgtataccagtatcagatgtgcctcttctgctaatg
aatcctgactgttcgctaccaaaagatttaattttaacaagaattcccgtgcctccaatt
tgcattaggccgagcgttgtctccgacgtaaaggcaggcacaaatgaggataatttaaca
atgaaactgtcagaaattgtcttcattaatgacgttattcaaaaacatagacaaagcgga
gccaaggtgcagatgtataacgaagattgggaatttttgcagttgcattgcgctctttat
gtcaatagcgaaatgtccggtatcccactaaacatgcagccaaaaaagtctggtcgaggt
ttagttcagcgcctcaaaggaaaacaaggcagatttcgcggcaacttatctgggaaacgt
gttgatttttcgagcagaactgtgatttcgccagatcccaatttacgcattgaacaggta
ggagtaccgatttatgttgcaaaaatcttgacatatccagaaagggtgaatgcttctaac
atagaattaatgcgtaaattggtgcaaaatggtcctgacgttcacccaggagctaatttt
gtacaacaaagaagtacagaatttaaaaaatttttacgctatggaaatagattgaagatt
tcccaggaactaaagtatggagacatcgttgagagacatctccgagacgacgatgttgtc
ttattcaatcgacaaccttcactacataagctcagtataatggctcataaagccaaagta
ttagaacaccgaaccttcagatttaacgaatgtgtctgcacgccttacaatgccgacttt
gatggtgatgaaatgaacctacatttaccacaaactgaggaagctagagccgaggcacta
gtattaatggggaacaaatcaaatttagtaacaccgcgaaatggcgagctgctgattgct
gctactcaggattttataactggtggatatcttttaacgcaaaaggatacattcctcaat
aaatcgcaagcttgtcaattggcgagttgtcttctggcgggagatgatgcatcaatgaac
attgatctgccagaaccagctattatgaaaccagtagaactgtggacgggtaaacagatt
tttagtttgatactaaagccgaataaaaaatgtccaattagagccaacttgaaaaccaag
ggcagagcatacactagtaacgaagagctgtgcattaatgattcgtttgtaataatccgt
aattctgaactcctcgctggatctatggacaagtctacgctaggttccggatctaagcaa
aatattttttacgttttattgagagactggggagaagacgcttcaacgacagctatgtgg
cgtttagctcgagttgcaagctactatcttatgaacagaggtttttcaattggaatcagt
gacgtcacacctggacaaggcctgctcaaagctaaacacgatcttcttactgctgggtat
tcgaagtgtactgaatacataactcaaatggaatctggaaggttgatttgtcagccaggt
tgttctgaagaagaaagtctagaggcaatgattttgaaagaattatctgttattcgtgat
cacgcaggaaaagcctgtttgaaggaactgcatccaagtaacagtcccctggtcatggct
ctctctggtagcaagggcagctttattaacatttcacaaatgattgcttgcgtcggacaa
caagctatcagtgggaaacgtgtaccaaacgggtttgaggatcgtgctctgccgcacttt
gggcgtcattccaaagttcctgcagccaaaggctttgtagaaaactcattctattctggt
cttactccaactgaattctttttccacacaatgggaggcagagaaggtctcgtagacaca
gctgtaaaaactgcagagacaggatatatgcaaagaagattggtcaaaagtttggaggat
ctttgcctccactatgatatgacggtcagaaattctgtcggagatattgtgcaaattttg
tatggtggagatggtttagatccaacgtacatggagggaaaggactgtccagtcgattat
aaaagagtcttggatcacacacgagcaaagtctccctacagagatgagcaacctttggat
ggaacaagtgtaattagtgctacgactgagctgttgaaatctgaggactactcatgcctg
agtgacgagtttaagcaagaactagaaacattcctgaagtccgtcgcgcacaagataaat
aggctgcgacacaatgctacgtcaaaatcctcagctgttcaacaattggaacgtctcacg
gtatctcaattggtggaatttatgcatacgtgtaaggaaaaatacatgagagcaaagatt
gaaccaggcacagcggttggagctcttgctgcacaaagtattggtgaaccaggcactcaa
atgacattaaaaactttccactttgctggtgtcgcctccatgaatattacacagggtgtt
cctcgtataaaagaaatcattaatgctaatagtaatatcagtacacctatcattaccgcc
gctttggaaaatgatacagatccagaatttgcaagacgagttaaaggtagaatagaaaaa
acaacattaggtgaagttacggaatacatcgaagaagtatatctgccagatgactgtttt
cttttaattaagttagatgtcgacaggataaaacttctgaaattggaagttgatgcaaat
tctattcgttactcaatttgcacatcgaaacttcgtctaaatccaaaactcgtcaatgta
agaggggattcaattattacagtgaatcctaacaagcagaaacttaacataaactatgct
ctcatgcaactcaaagaaactgttccaaacgttgtcataaagggtctgccgtctgttgcc
agagcagtaattcacaatgacgactccaccggaaagactagatacagattgttcgttgaa
ggtgataatatgcgcgaggtcatggccacgcctggggtcttagggaaaaaaactacatct
aataatacgatggaggtattcaaaacattgggaattgaggctgctcgagcaacgatcatg
acggagatcaaattagtaatggagaatcatggtatgagcatagacaggcgtcatcctatg
ttagtagctgatttaatgactagcagaggggaagttcttggcatcacccgtcatggtctt
tctaaaatgaaagagtctgtgctcaacttagcctcttttgagaaaacagcagaccatcta
ttcgacgcagcttactacggacagaaggataccatctctggcgtatccgagtcaattatc
gttggtattccagtccctgttggcacaggaatcttcaagttacttcacaaagctgaggat
agtaaacctgaaaggaggcagctgatatttgatgacccgcaatatcacaagaagataacg
aaacctaccacgtcctag
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