Aspergillus fischeri: NFIA_011570
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Entry
NFIA_011570 CDS
T01070
Name
(RefSeq) DNA-directed RNA polymerase I subunit (Rpa190), putative
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
nfi
Aspergillus fischeri
Pathway
nfi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NFIA_011570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfi03021
]
NFIA_011570
Enzymes [BR:
nfi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NFIA_011570
Transcription machinery [BR:
nfi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
NFIA_011570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
4592201
NCBI-ProteinID:
XP_001264366
UniProt:
A1D226
LinkDB
All DBs
Position
Unknown
AA seq
1681 aa
AA seq
DB search
MATFARPVASSISGIEFGVYSDEDIKSISVKRIHNTPTLDSFNNPVPGGLYDPALGAWGD
HVCTTCRQNSWSCTGHPGHIELPVRVYNVTFFDQLYRLLRAQCVYCHRFQMSRVQINAYV
CKLRLLQYGLVDEVEAIEAMGTGQGNKKKSAKDADDSGSEEEDDDDLVARRNAYVKKVIR
EAHAAGRLKGIMSGAKNPMAAEQRRTLVKQFFKDLVGIKKCSSCSGISPSYRRDRFSKIF
RKPLPEKSRLAMVQAGFQAPNSLILLQQAKKFDMKTKESMANGISDTASAFSESHGAEEE
VARGNAVVAQAESKKSAAGDAGQYMPSPEVHAAMVLLFEKEKEILSLIYNSRPLPKKEAK
VSPDMFFIKNILVPPNKYRPAAPQGPGEIMEAQQNTPFTHILKNCDIINQISKERQNAGA
DSVTRMRDYRDLLHAIVQLQDTVNGLIDKERGASGPAAGQAANGIKQILEKKEGLFRKNM
MGKRVNFAARSVISPDPNIETNEIGVPLVFAKKLTYPEPVTNHNFWEMKQAVINGPDKYP
GATAIENELGQVTNLKFKSLDERTALANQLLAPSNWRMKGARNKKVYRHLTTGDVVLMNR
QPTLHKPSIMGHKARVLANERVIRMHYANCNTYNADFDGDEMNMHFPQNELARAEAMMLA
DADHQYLVATSGKPLRGLIQDHISMGTWFTCRDAFFDEEDYHELLYSCLRPENSHTITER
IQLVEPTLLKPKRLWTGKQVITTILRNIMPPGRAGLNLKSKSSTPGDRWGEGNEEGTVIF
KDGEMLCGILDKKQIGPTAGGLIDAIHEVYGHTIAGRLISILGRLLTRYLNMRAFTCGID
DLRLTKEGDRLRKEKLSQAASIGREVALKYVTLDQTTVPDQDAELRRRLEDVLRDDDKQS
GLDSVSNARTAKLSTEITQACLPKGLAKPFPWNQMQSMTISGAKGSSVNANLISCNLGQQ
VLEGRRVPVMISGKTLPSFRAFDTHPMAGGYVCGRFLTGIKPQEYYFHAMAGREGLIDTA
VKTSRSGYLQRCLIKGMEGLRAEYDTSVRESSDGSIVQFLYGEDGLDITKQVHLKDFDFL
TSNYVSIMQSVNLTNDFHNLEKDEVTAWHKDAMKKVRKTGKVDAMDPVLSVYHPGGNLGS
TSEAFSQALKKYEDANPDKLLRDKKKNIDGLISKKAFNTLMNMKYLKSVVDPGEAVGIVA
SQSIGEPSTQMTLNTFHLAGHSAKNVTLGIPRLREIVMTASAHIMTPTMTLILNEELSKE
HSERFAKAISKLSIAEVIDKVQVKERIAAAGSRSKVYDVEISFFPAEEYTKEYAITTKDV
QNTLQNKFIPKLVKLTRVELKRRNDEKSLKSFSTAQPEIGVSVGVIEEGPRGPDREVEPA
QDDDEDDEDDAKRARSGQNRSNQVSYEGPEQEEIDMVRQQDAVEDDEDEDESGENRRQDS
DVDMEDDSDEETDDETKDTKLREEDIKGKYGEVTQFKFNPSKGTSCVVQLQYDISTPKLL
LLPLVEEAARSAVIQSIPGLGNCTYVEANPLKGEPAHVITEGVNLLAMRDYQDIIKPHSI
YTNSIHHMLMLYGVEAARASIVREMSDVFQGHSISVDNRHLNLIGDVMTQSGGFRAFNRN
GLVKDSSSPLAKMSFETTVGFLKDAVIERDFDNLKSPSSRIVAGRSGMVGTGAFDVLAPV
A
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtttgcacggcctgtagcctcgtcaatttcgggtattgaattcggagtctat
tcggatgaagatatcaagtccatttccgtaaagcgaattcacaataccccgactttggat
tcttttaataatcctgtccctggtggtttatacgatccggctctgggtgcttggggagat
catgtctgcacgacctgccgtcagaattcgtggtcttgtactggccatcctggacatatt
gagcttcctgttcgcgtttacaatgtcactttcttcgatcagttataccgactacttaga
gcgcaatgtgtctactgccatcgtttccagatgtcccgagttcagatcaacgcctatgtg
tgcaagctacgactcctacaatacggactagtcgacgaagttgaggccatagaagcgatg
gggactggtcaaggaaacaagaagaagtctgcaaaggacgccgatgattcaggcagcgag
gaagaagacgacgatgacctcgtcgctcggaggaatgcatatgtcaagaaggtgattcgg
gaggcacatgcggccggcagactgaagggtattatgtctggtgcgaagaatcccatggct
gcggagcagagacgcactttggtcaagcagttcttcaaggatctcgttggcatcaaaaaa
tgcagcagctgcagcggaatctcacccagttaccggagagatcgtttctcgaagattttc
cgaaagcctctgcccgagaagtccagattagccatggtacaggctggattccaagcgccg
aactcccttattcttctccagcaggccaagaagttcgatatgaagacaaaagagtcgatg
gccaatggcatttctgatacggctagtgcattttctgaatcacatggcgctgaggaagaa
gttgctcgcggcaatgccgtcgttgcacaagccgaaagcaagaagtcagcagctggcgat
gctggacaatatatgccttcgccagaagtgcacgctgccatggtactgctcttcgagaag
gagaaagagattctgagccttatatacaactctcggccgcttccaaaaaaggaagctaaa
gtcagcccggacatgttcttcatcaagaacatcctggtaccaccgaataaatatcgacca
gctgcccctcaaggacccggtgagattatggaagcacaacaaaacaccccgttcacccac
attctgaagaactgtgacattatcaatcagatcagcaaggaaagacagaatgctggtgcc
gattcagtcactcgaatgcgtgattatcgcgacctccttcatgctatcgtacagctccaa
gataccgttaacgggttgattgacaaggagagaggcgcatcgggcccggcagcaggccag
gccgctaacggtatcaagcagattttggaaaagaaggagggtctgttcagaaagaacatg
atgggcaaacgtgtcaattttgctgctcgaagtgtcatttctcccgaccccaatattgaa
acgaacgagattggtgttccactggtcttcgcgaaaaagctcacttatccagagcctgtg
acgaaccacaacttctgggaaatgaagcaggcagtcatcaatggtccagacaaatatccg
ggtgccactgcgattgagaacgaattgggccaagtgaccaacctcaaattcaagagtctt
gatgagcgaacagctttggccaatcagttgctggcaccgtcgaattggcgcatgaaggga
gcacgtaacaagaaggtctaccgtcaccttaccactggtgatgtcgtcctcatgaaccgg
cagcctacgcttcacaagccgtccatcatgggtcataaggctcgtgtgctggcaaatgag
agagtcattcgcatgcactacgctaattgtaacacctacaatgccgacttcgatggtgac
gaaatgaatatgcatttccctcagaacgaacttgctcgagctgaagctatgatgcttgca
gacgccgaccaccagtatcttgtggcgacatctggcaagcctttgagaggtttgattcaa
gatcacatctcgatgggaacgtggttcacatgtcgagacgcatttttcgacgaggaggat
tatcatgagctgctctacagctgtctcagacctgagaactctcatactatcacagaacgg
attcagcttgtggagcctactctgttgaaaccaaagcgtctctggactggaaagcaagtg
attacgactatcctcagaaatatcatgcctccgggaagagcgggtctcaacctgaagagc
aagtcttccactcctggagaccgatggggcgagggcaacgaggagggcactgtaatcttc
aaagacggcgagatgctgtgtggtattctcgataagaagcaaatcggccctacggctggc
ggtcttatcgatgccatccatgaggtctacggccacaccattgccgggcggctgatcagt
attctcggacggctcttgacaagatatctgaacatgcgtgcattcacttgcggtatcgat
gatcttcgattgaccaaggaaggtgatcgtctccgtaaagagaagcttagtcaagctgcc
agcatcggtcgggaggtcgctctcaagtacgtgactctcgaccaaaccacagttcctgat
caagatgccgaactgcgccgaagactggaagacgttcttcgggacgatgataagcaaagt
ggtttggacagtgtctcgaacgctcggacggctaagctctctaccgagatcactcaagct
tgccttccaaaaggcttggccaagcctttcccgtggaatcagatgcagtctatgactatc
tctggagctaagggttcaagtgtcaacgcgaaccttatttcttgcaacctgggacagcag
gttttggaaggtcgacgtgtacctgttatgatcagtggcaaaaccttgccatccttcagg
gcctttgatactcaccctatggcgggcggttatgtttgcggccgtttcttgactggcatc
aagcctcaggagtactacttccatgctatggcgggtcgagaaggtcttatcgatactgcc
gtcaaaacctctagatctggttatctgcagcgttgtctgatcaagggtatggaaggtctg
agagccgagtacgatacatctgtccgcgagtcttccgacggttccatcgttcaatttttg
tacggagaggatggacttgatatcacaaaacaagtgcacctcaaggacttcgatttcctg
acttccaattatgtctctatcatgcagtctgtcaaccttacaaacgacttccataacctg
gagaaggatgaggtgacagcctggcacaaggatgccatgaagaaggtccgcaagacagga
aaagtcgacgctatggacccggtgctgtctgtctaccaccctggaggtaacctgggtagt
acatccgaagcattctcgcaggcactcaagaagtacgaggacgctaaccctgacaaactt
cttcgagacaagaagaagaacatcgacggtctcatcagtaagaaggcgttcaatactttg
atgaacatgaagtatctcaagtctgttgtcgatcctggcgaagcagtcggtatcgttgct
agtcagtctattggagagccgtcaacccagatgaccctgaacaccttccacttggctggt
cactcggcaaagaacgtgacgctgggtattccccgtctgcgtgaaattgtcatgactgca
agcgctcacatcatgacgcctacgatgacgctgatcttgaacgaagaattgtcaaaagaa
cattcggagaggtttgcaaaggccatcagcaagctcagtattgcggaggtgatcgacaag
gttcaagtcaaggagagaattgccgcagccggttcacgctccaaggtttacgatgtcgag
atttccttcttcccagcagaggagtacacgaaagagtatgcgatcacaaccaaggatgtc
caaaacactctgcagaacaagttcattcccaagcttgttaagctcaccagagtcgagctc
aagaggcgtaatgacgagaagtcattgaagagcttctctacggcccagcctgagattggt
gtttctgtgggcgtcatcgaggaagggccgcgaggacccgaccgtgaggtcgaacccgca
caagacgatgatgaggacgatgaagacgacgccaagcgggcgaggagcggtcagaaccgg
tcaaaccaggtctcgtacgaaggtcccgagcaggaagaaatagacatggtccgacagcag
gatgctgtagaagatgacgaagacgaggacgaaagtggcgagaaccgtcgccaagattct
gacgtcgacatggaggacgactccgacgaagaaacagacgatgagacgaaagacaccaaa
ttgcgcgaggaggatattaagggcaaatatggcgaagtcacacagttcaagttcaacccc
agcaagggcacatcatgcgtcgtccagctgcagtatgacatctccacccccaagctcctc
ctcctgcctctggtcgaagaggccgctcgcagcgcagtcatccagtctatccctggcctc
ggcaactgcacgtatgtcgaggcgaacccactcaagggcgagcccgcacatgtcatcacc
gagggtgtcaacctgcttgccatgcgcgattaccaggatatcatcaagcctcactccatc
tacaccaactcaatccatcacatgcttatgctctacggtgtcgaggccgcgcgcgcatcc
atcgtgcgagaaatgtccgacgttttccagggccacagtatctcagtcgacaaccgtcat
ctgaacctgattggtgatgtgatgacccagtctggtggtttccgcgccttcaaccgcaac
ggtctcgtcaaggatagctcgtcgcctcttgccaagatgagtttcgagaccaccgtcggt
ttcctgaaggatgctgtgatcgagagggacttcgataacctcaagagccctagcagcagg
atcgtggcaggtcggtctggcatggttggcacgggcgccttcgacgtgcttgctcctgtc
gcatga
DBGET
integrated database retrieval system
