Aspergillus fischeri: NFIA_075860
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Entry
NFIA_075860 CDS
T01070
Name
(RefSeq) mRNA cleavage factor complex II protein Clp1, putative
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
nfi
Aspergillus fischeri
Pathway
nfi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NFIA_075860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfi03019
]
NFIA_075860
Enzymes [BR:
nfi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
NFIA_075860
Messenger RNA biogenesis [BR:
nfi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
NFIA_075860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_N
CLP1_P
Clp1
ATP_bind_1
MMR_HSR1
nSTAND3
AAA_35
AAA_24
Motif
Other DBs
NCBI-GeneID:
4586325
NCBI-ProteinID:
XP_001259553
UniProt:
A1DE49
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MSLPGLELSQTSSEREFVPAPPTQITLSKGSEWRFEVAFGTAIRVKLLAGTAELFGTELA
ASQTYTFSGTKAAIYTWHGCTLEVSAGDTISTIDGLGPAGLNGEGARGYGAGGCQSEYTA
EETPMVEYANVHFALEAMRQEAKATGKDGPRVLILGPENAGKTSVAKILTAYATKVGRQP
IVVNLDPAEGMLSVPGTLTATAFRTMMNVEEGWGSSPMSGPSAVPVKLPLVYFYPLQNPL
EAEGAVYRPIVSRLALSVTGRMAEDEDTRETGIIVDTPGILSAGKPGSLEIINHIVTEFA
ITTILVIGSERLYSTMMKNYDNKPTSSASAAASDERITVVKLSKSGGCVDRDAAFMKSVR
ESQIRTYFFGNPIPSTASAALSMSASSTTNVTLSPHAQQLDYDSLAVYNYTIASSDEDED
EYDPSQFGTSDTFLPKGSNDAEGPEAKHAEETSFASSVPGLGGSSGEDAASGSSAVPLKK
VPPPAPNTLANSLLAVTHAAPNASPAEIRDASIMGFLYVADVDSEKGKIRVLAPIGGRVP
PRAIVWGKKWPGEVVGLVG
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctccccggtttagagctctcgcagacctcatcggagagggagtttgtccccgca
ccgccaacacagattaccttgtccaagggctcagaatggagatttgaggttgcatttgga
acagcgatacgagtcaagctattggccggcaccgcagagcttttcggcacagaacttgct
gcatcgcagacgtataccttctccgggacgaaagcggcgatctacacctggcacggctgc
acgctcgaggtcagcgccggcgatacgatatcgacgatagatggactgggaccggcgggt
ctgaacggcgagggggcccgtggctacggcgcgggcggctgccagagcgagtatacggcc
gaggagacgccgatggtcgagtatgcgaatgtgcatttcgcgctggaggcgatgcgccag
gaggccaaggcgacgggcaaggacgggccgcgggtgctgattctggggccagagaacgcg
gggaagacgagcgtggcgaagattctgacggcgtatgcgactaaggtcgggaggcagccg
attgtggtcaatttggatccggcggaggggatgctcagcgtcccagggacgctgacggcg
acggcgttccggacgatgatgaatgttgaggaggggtggggaagtagtcccatgtcgggg
ccgagtgcggtacctgtgaagctgccgttagtttatttctatccgttgcagaatccgctc
gaagcggagggtgctgtctatcggcctattgtgtcacggctggcgctgagtgtgacgggg
cggatggccgaggatgaggatacgcgcgagacgggcatcatcgttgatacgccgggcatt
ttgagcgctggcaagccgggtagtcttgagattatcaatcacatcgtgacggagttcgca
attacgaccatcctggtcataggctcggaacggctttacagcaccatgatgaagaactac
gacaacaagccgacgtccagtgcgtctgccgcagcgtcggatgagcggatcaccgtcgtg
aagctctccaagtctggtggctgcgtggaccgcgacgcagcgtttatgaagtcagtgcgt
gagtcgcagattcgaacatacttcttcggcaatccgattccttccacggcatcggcggcg
ctctcgatgtctgcgtcttcgacgacaaatgttacactctctccccatgcccaacagctc
gattacgactccttggccgtttacaactatacaatcgcctcttcagatgaagacgaggac
gaatacgatccgtctcaatttggcaccagtgatacattccttcccaaaggaagcaatgac
gcggagggtccagaggccaagcatgccgaggagacatcgtttgcttcctccgtgccgggc
ttaggaggctcatcaggcgaggatgcagcatcaggcagctcggctgtacccctgaaaaaa
gttccaccccctgcaccgaacacgctcgccaattccctgctcgcagttacacacgccgcg
ccgaatgccagtccggcagagattcgcgatgccagcatcatgggattcctgtacgtggcc
gatgtagatagcgagaagggcaagattcgggtactggctccgatcggtgggcgagtaccg
ccaagggccattgtctggggcaagaagtggccaggagaggtggttgggttggtgggatag
DBGET
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