KEGG   Aspergillus fischeri: NFIA_088270
Entry
NFIA_088270       CDS       T01070                                 
Name
(RefSeq) RNA polymerase II subunit 3
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
nfi  Aspergillus fischeri
Pathway
nfi03020  RNA polymerase
nfi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nfi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NFIA_088270
  09124 Replication and repair
   03420 Nucleotide excision repair
    NFIA_088270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nfi03021]
    NFIA_088270
   03400 DNA repair and recombination proteins [BR:nfi03400]
    NFIA_088270
Transcription machinery [BR:nfi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     NFIA_088270
DNA repair and recombination proteins [BR:nfi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      NFIA_088270
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 4587326
NCBI-ProteinID: XP_001260768
UniProt: A1DHL4
LinkDB
Position
Unknown
AA seq 336 aa
MDYEMDIEPTGPQVTVREAEPYRVDFKLSSVDLAFANSLRRVILAEVPTMAIDLVEVEKN
TSVLPDEFLAHRLGLIPLNSKNCDQDVEYTRDCECEDHCARCSVTLTLHARCTGDEIMPV
YARDLVVSGERANEWVGDPVITDPEGKGPLICKLRRGQELKMTCVAKKGIAKEHAKWAPT
AAVGFEYDPHNNLRHVDYWYEEDPIKEWPVSANAAWEHAAPPDQPFDYDAQPNNFYIDVE
SIGNLDPDMIIQQGIIVLQRKLATVISSLSGAGNGGRNGLPEDEDMMGVRSPDAYEPPEG
MDGGFTAYANGGTSAWGASAATPYGATPYGGSGYGF
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggattatgagatggatattgagcccactgggccccaggtgaccgtgagagaggccgag
ccataccgcgtcgatttcaaactcagctccgtcgatctcgccttcgccaactcccttcgc
cgagtcatcctcgccgaagtcccaacgatggccatcgacctggtcgaagtcgaaaagaac
acctccgtactccccgacgaattcctcgcccacagactgggcctcattcccctcaactcg
aaaaactgcgaccaggacgtcgagtacacgcgcgactgcgaatgcgaggaccactgcgcg
cgctgcagcgttacgctcacactgcacgcgcgctgcacaggcgacgagatcatgcccgtc
tatgcgcgggatctggtcgtcagcggcgagcgcgccaacgagtgggtgggggaccctgtt
atcacggatccggagggaaagggccctctgatctgtaagctgcggcgggggcaggaactc
aagatgacctgtgttgcgaagaaggggatagccaaggagcatgcaaagtgggcgcccact
gcggcggttgggttcgagtatgacccgcacaataacctccggcatgtggattactggtac
gaggaggatcccattaaggaatggcccgtctccgcaaacgccgcctgggaacacgccgcg
cccccggaccaacccttcgactacgacgctcaaccaaacaacttctacatcgacgtcgaa
agcatcggaaacctcgacccggacatgatcatccagcagggcatcatcgtcctccaacgc
aaactcgccaccgtcatctcctccctctccggcgccggcaacggcggccgcaacggcctc
cctgaagacgaggacatgatgggcgtccgcagtcccgacgcctatgagccgccagagggc
atggacggcgggttcacagcgtacgccaacggcggtacgagtgcctggggagccagcgcg
gcaactccctacggtgcgacgccgtacggtggcagtgggtacggcttctag

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