Candidatus Nitrosocosmicus franklandus: NFRAN_0134
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Entry
NFRAN_0134 CDS
T05935
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
nfn
Candidatus Nitrosocosmicus franklandus
Pathway
nfn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nfn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NFRAN_0134 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nfn01007
]
NFRAN_0134 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nfn03016
]
NFRAN_0134 (lysS)
Enzymes [BR:
nfn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
NFRAN_0134 (lysS)
Amino acid related enzymes [BR:
nfn01007
]
Aminoacyl-tRNA synthetase
Class I (A)
NFRAN_0134 (lysS)
Transfer RNA biogenesis [BR:
nfn03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NFRAN_0134 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
TMEM247
tRNA-synt_1
T4_tail_cap
Motif
Other DBs
NCBI-ProteinID:
VFJ12455
UniProt:
A0A484I469
LinkDB
All DBs
Position
NFRAN:121696..123477
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AA seq
593 aa
AA seq
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MSKTVENIIGKGTWIDKIANTIIEREKKLGRSTSLIRVESGLGASGIPHIGSMGDAVRAY
GISLALQNLGFNSELIAFSDDLDGLRKVPHGMPAWLNEYICKPVSSIPDPFGDCHDSYGD
HMSGLLLEGLDASNIKYIFKSGTKTYKEGLLADQTHTILSKSKLIGDKISESTGQQKYTQ
FLPYFPICEQCNRLYVANSIEYIPEERVVTYTCSGNTIGKKPIKGCGHNGQSKIDLGNGK
LAWKVEFAARWQAFDIRFEAFGKDIMDSVKINDWVSEEILNFHHPLHAKYEMFLDKGGKK
ISKSAGNVLTPQMWLQYGTPQSLLLLLFKRISGTRHVGIDDIPQLMDEYDLYEDIYFGKV
KEPNDSKRIKINGIYEYINHLNPPKVYPSLHIPYRILIQQAELFKNQTIESNIVNQIFER
LKKYGLVKNEDYSNELLQKKINLAIRWARDLSDIDPSESNSIGSTISSNNVINYQQGQIS
EKASSNDTNLLTSEQKTLLEKIKIEFENLYNKTLKTPPEENSNNDSNNDQLAQEIQSIIF
NNARSSNLQPKEVFRLFYRILINSEKGPRLGNYIADLGLQNVIATLEKKISSS
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaccgttgaaaatattatcggtaaagggacttggatagataagattgcaaat
acaattattgagagagaaaagaaactaggaaggtctactagcctgataagggttgaaagt
ggactaggtgcttcgggaattcctcatattggaagtatgggtgacgcagtacgagcttat
ggaatttcgttagccctacagaatctagggtttaactcggaattgattgcattttcggat
gatctggatggactccgaaaagtacctcatggtatgcccgcctggctaaatgagtacatt
tgtaaaccagtctcttctatccctgatccatttggagattgccatgattcgtatggtgat
cacatgagcggccttttgttagaaggtttagacgcctcaaacataaaatatattttcaag
agtggaacaaaaacatacaaagaaggactcttagcagatcaaactcataccattctatct
aaaagcaagttgataggagataagatttcagaatcaactggtcaacagaaatatacacaa
tttttgccttactttcctatctgtgaacaatgtaacaggctatatgttgcaaattctata
gaatacatacctgaagagagagtcgtgacatatacttgtagtggtaacacaataggtaag
aaaccaattaaaggatgtggtcacaatggtcaatcaaaaatagatttaggaaacggaaaa
cttgcgtggaaagtagaatttgcagctagatggcaagcttttgacataagatttgaagca
tttggaaaagatattatggattcggttaaaatcaatgattgggtttctgaagaaattcta
aacttccatcatccacttcatgccaaatatgaaatgttcctagacaagggaggaaaaaaa
ataagtaaatcggctggaaatgttttgacaccgcagatgtggcttcaatatggaacacca
caatctctactattattactttttaagagaatttcaggtacaagacatgttggcatagat
gacattcctcaattaatggatgagtatgatctatacgaagacatttattttggaaaagta
aaggaaccaaatgatagtaaacgaattaagataaacggaatttatgaatatataaaccac
ctaaacccaccaaaagtatatccatcattacacattccttacaggatcttgatccaacaa
gcagagttatttaagaatcaaaccatagagtccaatatagtaaaccagatattcgaaagg
ctgaaaaagtatggactagtaaaaaatgaggattattccaatgaattattgcagaaaaaa
atcaatctagcgataagatgggcgcgtgatttatctgatatcgacccgagtgaatccaat
agtataggtagtactattagtagtaataacgttattaattatcaacaaggccagattagt
gaaaaggcaagctccaatgatacaaatctgctgacatctgaacaaaaaaccttgcttgaa
aaaataaaaatagaattcgaaaacctttataataaaacacttaaaactccaccagaggaa
aacagcaataatgatagcaacaacgaccagctagcacaagagatccaatctattatcttt
aacaatgcaaggagtagtaatctgcagccaaaagaagtctttaggttgttttataggatt
ttgattaattcagaaaagggacccaggttaggtaactacatcgcagatctaggcttacaa
aacgtaatagccacactggaaaaaaagatctcctcttcttaa
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