Nocardia farcinica NCTC11134: ERS450000_01336
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Entry
ERS450000_01336 CDS
T04524
Symbol
hsdM
Name
(GenBank) Type I restriction enzyme EcoKI M protein
KO
K03427
type I restriction enzyme M protein [EC:
2.1.1.72
]
Organism
nfr
Nocardia farcinica NCTC11134
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
nfr02048
]
ERS450000_01336 (hsdM)
Enzymes [BR:
nfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.72 site-specific DNA-methyltransferase (adenine-specific)
ERS450000_01336 (hsdM)
Prokaryotic defense system [BR:
nfr02048
]
Restriction and modification system (R-M system)
Type I R-M system
ERS450000_01336 (hsdM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N6_Mtase
HsdM_N
UPF0020
MmeI_Mtase
Ubie_methyltran
MTS
Eco57I
Motif
Other DBs
NCBI-ProteinID:
CRY75449
UniProt:
A0A0H5NJS4
LinkDB
All DBs
Position
1:complement(1345904..1347448)
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AA seq
514 aa
AA seq
DB search
MITGDIKNKVDAVWDAFWTGGISNPLEVMEQITYLLFIRRLDDEQTRALERANLLAQPLE
GNPFPEGNDPEGRPYNDLRWSVFRDRHADEMFDIVANRVFPFIKEMRGEDSTYAHFMKDA
RLTIPNPGMLQRVVDRLDKVPMENRDTKGDIYEYLLAKIASAGQNGQFRTPRHIIELMVH
MMAPKPGDTIVDPASGTCGFLVAASEYMRAHHADAINSGAGKHHYHHKMFHGFDFDNTML
RIGSMNMLLHGIEQPDIRYRDSLAEANTGDAEAYSLVLANPPFAGSLDYENTAKDLQQIA
KTKKTELLFLALFLRLLKPGGRAAVIVPDGVLFGSSKAHKELRRILVEEQKLDAVVKLPS
GVFKPYAGVSTAILFFTKTNSGGTDNVWFYDVQADGWSLDDKRNPLLDVGKLGALAELSD
DEHAKNNLPDVLRRWAERDGAELERARTEQSFCVPKDDIAAQGYDLSLNRYKEVVHEEVE
HRSPTEILDELDRLEKEITDGMAQLREMLAGGVA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaccggtgacatcaagaacaaggtcgacgcagtctgggacgcgttctggacaggt
ggcatctccaatccactcgaggtgatggagcagatcacatacctgctgttcatccggcgc
ctggacgatgagcagacccgcgcgctggagcgggcgaacctgctggcgcagccgctcgag
ggcaacccgttcccggaagggaacgacccggagggccggccgtacaacgacctgcgctgg
tcggtgttccgggaccggcatgccgacgagatgttcgacatcgtcgcgaaccgggtgttc
ccgttcatcaaggagatgcgcggcgaggactccacgtatgcgcacttcatgaaggacgcc
cggctcacgatcccgaaccctggcatgttgcagcgggtagtcgatcgcctggacaaggtg
ccgatggagaaccgcgacaccaagggcgacatctacgaatacctgctcgcgaaaatcgcc
tccgccggccagaacggccagttccgcaccccgcgccacatcatcgagctgatggtccac
atgatggccccgaaacccggcgacacgatcgtcgacccggcgtccgggacatgtggcttc
ctggtggctgcgtcggagtacatgcgcgcccaccacgcggacgcgatcaactcgggcgca
ggtaagcaccactaccaccacaaaatgttccacggcttcgacttcgacaacacgatgctg
cgaatcgggtcgatgaacatgctgctgcacggcatcgaacagcccgacatccgctaccgt
gattccctcgcggaggcgaacaccggtgacgccgaagcgtattcgctggtcctggcgaat
cccccgttcgccgggtcgttggactacgagaacaccgccaaggatctacaacagatcgcg
aagacgaagaagaccgaactgctgttcctggcgttgttcctgcgcctgctcaagcccggt
gggcgggcggcggtgatcgtgccggacggggtgctgttcgggtcctcgaaggcgcacaag
gaacttcggcggatcctggtcgaggagcagaagctcgatgcggtggtgaagctgccgtca
ggtgtgttcaagccgtatgcgggtgtgtcgacggcgatcctgttcttcaccaagaccaat
tccggtgggaccgacaacgtgtggttctacgacgtgcaggccgacggttggtccctggac
gacaagcgcaacccgttgctggacgtcggcaagctcggtgccctcgcggagctgtcggat
gacgagcacgcgaagaacaaccttccggatgtgttgcggcgctgggccgaacgcgacggg
gccgagctggagcgggctcggacggagcagagcttctgcgtgccgaaggatgacatcgct
gcgcaggggtatgacctgtcgctgaatcggtacaaggaggtcgtacacgaggaggtcgag
cacaggtcacctactgagattctcgacgagctcgatcggctcgagaaggaaatcaccgac
ggcatggcacagctgcgggagatgcttgcgggtggtgtggcgtga
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